Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Golph3-205ENSMUST00000228671 2842 ntBASIC17.36■□□□□ 0.37
Cx3cl1O35188 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.36■□□□□ 0.37
Cx3cl1O35188 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cx3cl1O35188 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.35■□□□□ 0.37
Cx3cl1O35188 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cx3cl1O35188 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cx3cl1O35188 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Gm7290-201ENSMUST00000104990 617 ntBASIC17.34■□□□□ 0.37
Cx3cl1O35188 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Gm12918-201ENSMUST00000120234 636 ntBASIC17.34■□□□□ 0.37
Cx3cl1O35188 Gm15710-201ENSMUST00000121821 636 ntBASIC17.34■□□□□ 0.37
Cx3cl1O35188 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cx3cl1O35188 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Gm5075-201ENSMUST00000196916 622 ntBASIC17.34■□□□□ 0.37
Cx3cl1O35188 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.34■□□□□ 0.37
Cx3cl1O35188 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.34■□□□□ 0.37
Cx3cl1O35188 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.34■□□□□ 0.37
Cx3cl1O35188 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cx3cl1O35188 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cx3cl1O35188 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.33■□□□□ 0.37
Cx3cl1O35188 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cx3cl1O35188 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cx3cl1O35188 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cx3cl1O35188 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cx3cl1O35188 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.33■□□□□ 0.37
Cx3cl1O35188 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cx3cl1O35188 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cx3cl1O35188 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cx3cl1O35188 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Cx3cl1O35188 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Cx3cl1O35188 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Cx3cl1O35188 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.33■□□□□ 0.36
Cx3cl1O35188 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cx3cl1O35188 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cx3cl1O35188 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cx3cl1O35188 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cx3cl1O35188 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cx3cl1O35188 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cx3cl1O35188 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cx3cl1O35188 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cx3cl1O35188 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cx3cl1O35188 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cx3cl1O35188 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.32■□□□□ 0.36
Cx3cl1O35188 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cx3cl1O35188 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cx3cl1O35188 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cx3cl1O35188 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cx3cl1O35188 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cx3cl1O35188 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.32■□□□□ 0.36
Cx3cl1O35188 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Mir5133-201ENSMUST00000174955 77 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms