Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Alx4O35137 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Alx4O35137 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx4O35137 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx4O35137 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx4O35137 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx4O35137 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx4O35137 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx4O35137 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Alx4O35137 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Alx4O35137 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx4O35137 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx4O35137 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx4O35137 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx4O35137 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx4O35137 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx4O35137 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx4O35137 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx4O35137 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx4O35137 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Alx4O35137 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx4O35137 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx4O35137 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Alx4O35137 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx4O35137 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Alx4O35137 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Alx4O35137 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Alx4O35137 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.5■□□□□ 0.23
Alx4O35137 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx4O35137 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx4O35137 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Alx4O35137 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Alx4O35137 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.49■□□□□ 0.23
Alx4O35137 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Alx4O35137 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Alx4O35137 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Alx4O35137 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx4O35137 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx4O35137 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Alx4O35137 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Alx4O35137 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.49■□□□□ 0.23
Alx4O35137 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Alx4O35137 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Alx4O35137 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx4O35137 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Alx4O35137 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx4O35137 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx4O35137 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx4O35137 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx4O35137 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.49■□□□□ 0.23
Alx4O35137 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Alx4O35137 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Alx4O35137 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx4O35137 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Alx4O35137 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Alx4O35137 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx4O35137 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Alx4O35137 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Alx4O35137 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx4O35137 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Alx4O35137 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Alx4O35137 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.48■□□□□ 0.23
Alx4O35137 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx4O35137 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.48■□□□□ 0.23
Alx4O35137 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx4O35137 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx4O35137 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx4O35137 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Alx4O35137 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx4O35137 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.47■□□□□ 0.23
Alx4O35137 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx4O35137 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Alx4O35137 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx4O35137 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Alx4O35137 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx4O35137 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx4O35137 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx4O35137 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx4O35137 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Alx4O35137 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Alx4O35137 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.47■□□□□ 0.23
Alx4O35137 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx4O35137 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Alx4O35137 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx4O35137 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx4O35137 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.46■□□□□ 0.23
Alx4O35137 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.46■□□□□ 0.23
Alx4O35137 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx4O35137 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx4O35137 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx4O35137 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx4O35137 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx4O35137 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Alx4O35137 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx4O35137 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx4O35137 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx4O35137 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx4O35137 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Alx4O35137 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx4O35137 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms