Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AlyrefO08583 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AlyrefO08583 Gm21814-202ENSMUST00000203277 873 ntBASIC18.67■□□□□ 0.58
AlyrefO08583 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.67■□□□□ 0.58
AlyrefO08583 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
AlyrefO08583 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AlyrefO08583 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
AlyrefO08583 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
AlyrefO08583 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
AlyrefO08583 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AlyrefO08583 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AlyrefO08583 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.66■□□□□ 0.58
AlyrefO08583 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AlyrefO08583 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AlyrefO08583 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AlyrefO08583 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AlyrefO08583 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.66■□□□□ 0.58
AlyrefO08583 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
AlyrefO08583 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
AlyrefO08583 Gm7153-201ENSMUST00000117092 455 ntBASIC18.66■□□□□ 0.58
AlyrefO08583 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.66■□□□□ 0.58
AlyrefO08583 Gm44549-201ENSMUST00000208351 577 ntBASIC18.66■□□□□ 0.58
AlyrefO08583 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
AlyrefO08583 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.66■□□□□ 0.58
AlyrefO08583 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.66■□□□□ 0.58
AlyrefO08583 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
AlyrefO08583 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AlyrefO08583 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AlyrefO08583 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
AlyrefO08583 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AlyrefO08583 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
AlyrefO08583 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AlyrefO08583 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AlyrefO08583 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
AlyrefO08583 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.65■□□□□ 0.58
AlyrefO08583 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.65■□□□□ 0.58
AlyrefO08583 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
AlyrefO08583 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
AlyrefO08583 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.65■□□□□ 0.58
AlyrefO08583 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AlyrefO08583 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
AlyrefO08583 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
AlyrefO08583 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AlyrefO08583 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.65■□□□□ 0.58
AlyrefO08583 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
AlyrefO08583 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
AlyrefO08583 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
AlyrefO08583 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AlyrefO08583 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
AlyrefO08583 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AlyrefO08583 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AlyrefO08583 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AlyrefO08583 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
AlyrefO08583 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AlyrefO08583 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
AlyrefO08583 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AlyrefO08583 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AlyrefO08583 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AlyrefO08583 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AlyrefO08583 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AlyrefO08583 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AlyrefO08583 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AlyrefO08583 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AlyrefO08583 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.63■□□□□ 0.57
AlyrefO08583 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AlyrefO08583 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AlyrefO08583 Gm7284-201ENSMUST00000131667 944 ntBASIC18.62■□□□□ 0.57
AlyrefO08583 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AlyrefO08583 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.62■□□□□ 0.57
AlyrefO08583 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AlyrefO08583 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AlyrefO08583 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AlyrefO08583 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AlyrefO08583 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AlyrefO08583 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AlyrefO08583 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AlyrefO08583 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AlyrefO08583 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AlyrefO08583 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
AlyrefO08583 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
AlyrefO08583 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
AlyrefO08583 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AlyrefO08583 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AlyrefO08583 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AlyrefO08583 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
AlyrefO08583 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.61■□□□□ 0.57
AlyrefO08583 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AlyrefO08583 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.61■□□□□ 0.57
AlyrefO08583 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.61■□□□□ 0.57
AlyrefO08583 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
AlyrefO08583 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AlyrefO08583 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.61■□□□□ 0.57
AlyrefO08583 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
AlyrefO08583 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AlyrefO08583 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AlyrefO08583 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AlyrefO08583 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
AlyrefO08583 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AlyrefO08583 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.6■□□□□ 0.57
AlyrefO08583 Mzt1-203ENSMUST00000227948 952 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms