Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
B020004C17RikJ3QP07 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
B020004C17RikJ3QP07 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
B020004C17RikJ3QP07 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.86■□□□□ 0.93
B020004C17RikJ3QP07 Gm42545-201ENSMUST00000202755 922 ntBASIC20.86■□□□□ 0.93
B020004C17RikJ3QP07 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.86■□□□□ 0.93
B020004C17RikJ3QP07 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
B020004C17RikJ3QP07 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
B020004C17RikJ3QP07 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
B020004C17RikJ3QP07 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
B020004C17RikJ3QP07 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
B020004C17RikJ3QP07 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
B020004C17RikJ3QP07 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
B020004C17RikJ3QP07 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.85■□□□□ 0.93
B020004C17RikJ3QP07 Gm37292-201ENSMUST00000192062 758 ntBASIC20.85■□□□□ 0.93
B020004C17RikJ3QP07 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
B020004C17RikJ3QP07 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.85■□□□□ 0.93
B020004C17RikJ3QP07 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
B020004C17RikJ3QP07 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
B020004C17RikJ3QP07 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
B020004C17RikJ3QP07 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
B020004C17RikJ3QP07 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
B020004C17RikJ3QP07 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
B020004C17RikJ3QP07 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
B020004C17RikJ3QP07 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.84■□□□□ 0.93
B020004C17RikJ3QP07 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.84■□□□□ 0.93
B020004C17RikJ3QP07 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
B020004C17RikJ3QP07 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.84■□□□□ 0.93
B020004C17RikJ3QP07 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
B020004C17RikJ3QP07 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
B020004C17RikJ3QP07 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
B020004C17RikJ3QP07 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
B020004C17RikJ3QP07 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
B020004C17RikJ3QP07 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
B020004C17RikJ3QP07 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
B020004C17RikJ3QP07 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
B020004C17RikJ3QP07 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
B020004C17RikJ3QP07 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
B020004C17RikJ3QP07 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
B020004C17RikJ3QP07 Gm13559-201ENSMUST00000120476 863 ntBASIC20.83■□□□□ 0.93
B020004C17RikJ3QP07 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.83■□□□□ 0.93
B020004C17RikJ3QP07 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
B020004C17RikJ3QP07 Mir6349-201ENSMUST00000184059 97 ntBASIC20.83■□□□□ 0.93
B020004C17RikJ3QP07 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.83■□□□□ 0.93
B020004C17RikJ3QP07 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
B020004C17RikJ3QP07 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
B020004C17RikJ3QP07 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
B020004C17RikJ3QP07 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
B020004C17RikJ3QP07 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
B020004C17RikJ3QP07 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
B020004C17RikJ3QP07 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
B020004C17RikJ3QP07 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
B020004C17RikJ3QP07 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.82■□□□□ 0.92
B020004C17RikJ3QP07 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
B020004C17RikJ3QP07 Timm23-208ENSMUST00000226683 750 ntBASIC20.82■□□□□ 0.92
B020004C17RikJ3QP07 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
B020004C17RikJ3QP07 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
B020004C17RikJ3QP07 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
B020004C17RikJ3QP07 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.81■□□□□ 0.92
B020004C17RikJ3QP07 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
B020004C17RikJ3QP07 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
B020004C17RikJ3QP07 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
B020004C17RikJ3QP07 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
B020004C17RikJ3QP07 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
B020004C17RikJ3QP07 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
B020004C17RikJ3QP07 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
B020004C17RikJ3QP07 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
B020004C17RikJ3QP07 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.81■□□□□ 0.92
B020004C17RikJ3QP07 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
B020004C17RikJ3QP07 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
B020004C17RikJ3QP07 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
B020004C17RikJ3QP07 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
B020004C17RikJ3QP07 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
B020004C17RikJ3QP07 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
B020004C17RikJ3QP07 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
B020004C17RikJ3QP07 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
B020004C17RikJ3QP07 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
B020004C17RikJ3QP07 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
B020004C17RikJ3QP07 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.79■□□□□ 0.92
B020004C17RikJ3QP07 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
B020004C17RikJ3QP07 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
B020004C17RikJ3QP07 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
B020004C17RikJ3QP07 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.79■□□□□ 0.92
B020004C17RikJ3QP07 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.79■□□□□ 0.92
B020004C17RikJ3QP07 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.79■□□□□ 0.92
B020004C17RikJ3QP07 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
B020004C17RikJ3QP07 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
B020004C17RikJ3QP07 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.79■□□□□ 0.92
B020004C17RikJ3QP07 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms