Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa8J3QNX5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa8J3QNX5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shisa8J3QNX5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa8J3QNX5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa8J3QNX5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa8J3QNX5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
Shisa8J3QNX5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.83■□□□□ 0.28
Shisa8J3QNX5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa8J3QNX5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa8J3QNX5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Shisa8J3QNX5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa8J3QNX5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Shisa8J3QNX5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms