Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sgo2bJ3QMK1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.48■□□□□ 0.55
Sgo2bJ3QMK1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sgo2bJ3QMK1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.48■□□□□ 0.55
Sgo2bJ3QMK1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sgo2bJ3QMK1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sgo2bJ3QMK1 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.48■□□□□ 0.55
Sgo2bJ3QMK1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sgo2bJ3QMK1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Sgo2bJ3QMK1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sgo2bJ3QMK1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sgo2bJ3QMK1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sgo2bJ3QMK1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sgo2bJ3QMK1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Sgo2bJ3QMK1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sgo2bJ3QMK1 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.47■□□□□ 0.55
Sgo2bJ3QMK1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Sgo2bJ3QMK1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sgo2bJ3QMK1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sgo2bJ3QMK1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sgo2bJ3QMK1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sgo2bJ3QMK1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sgo2bJ3QMK1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.47■□□□□ 0.55
Sgo2bJ3QMK1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sgo2bJ3QMK1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sgo2bJ3QMK1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sgo2bJ3QMK1 Gm18284-201ENSMUST00000172604 624 ntBASIC18.46■□□□□ 0.55
Sgo2bJ3QMK1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.46■□□□□ 0.55
Sgo2bJ3QMK1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sgo2bJ3QMK1 Gm10493-201ENSMUST00000097270 612 ntBASIC18.46■□□□□ 0.55
Sgo2bJ3QMK1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Sgo2bJ3QMK1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sgo2bJ3QMK1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sgo2bJ3QMK1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Gm8495-201ENSMUST00000188740 694 ntBASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sgo2bJ3QMK1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.44■□□□□ 0.54
Sgo2bJ3QMK1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sgo2bJ3QMK1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sgo2bJ3QMK1 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.43■□□□□ 0.54
Sgo2bJ3QMK1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sgo2bJ3QMK1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.43■□□□□ 0.54
Sgo2bJ3QMK1 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.43■□□□□ 0.54
Sgo2bJ3QMK1 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.43■□□□□ 0.54
Sgo2bJ3QMK1 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.43■□□□□ 0.54
Sgo2bJ3QMK1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sgo2bJ3QMK1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Sgo2bJ3QMK1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sgo2bJ3QMK1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sgo2bJ3QMK1 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.41■□□□□ 0.54
Sgo2bJ3QMK1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sgo2bJ3QMK1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sgo2bJ3QMK1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms