Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Gm17535J3KMR8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm17535J3KMR8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm17535J3KMR8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Gm17535J3KMR8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm17535J3KMR8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm17535J3KMR8 Dio3-201ENSMUST00000097228 1449 ntBASIC19.79■□□□□ 0.76
Gm17535J3KMR8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Gm17535J3KMR8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm17535J3KMR8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Gm17535J3KMR8 Gm2559-201ENSMUST00000201323 363 ntBASIC19.79■□□□□ 0.76
Gm17535J3KMR8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm17535J3KMR8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm17535J3KMR8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm17535J3KMR8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm17535J3KMR8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm17535J3KMR8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm17535J3KMR8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.78■□□□□ 0.76
Gm17535J3KMR8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.78■□□□□ 0.76
Gm17535J3KMR8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.78■□□□□ 0.76
Gm17535J3KMR8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Gm17535J3KMR8 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.78■□□□□ 0.76
Gm17535J3KMR8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm17535J3KMR8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Gm17535J3KMR8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm17535J3KMR8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gm17535J3KMR8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gm17535J3KMR8 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.78■□□□□ 0.76
Gm17535J3KMR8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.77■□□□□ 0.76
Gm17535J3KMR8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm17535J3KMR8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm17535J3KMR8 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.77■□□□□ 0.76
Gm17535J3KMR8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm17535J3KMR8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Gm17535J3KMR8 Trmt13-210ENSMUST00000198454 880 ntBASIC19.77■□□□□ 0.76
Gm17535J3KMR8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm17535J3KMR8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.77■□□□□ 0.76
Gm17535J3KMR8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gm17535J3KMR8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm17535J3KMR8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm17535J3KMR8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm17535J3KMR8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Gm17535J3KMR8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.76■□□□□ 0.75
Gm17535J3KMR8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.76■□□□□ 0.75
Gm17535J3KMR8 Gm22325-201ENSMUST00000158904 308 ntBASIC19.76■□□□□ 0.75
Gm17535J3KMR8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm17535J3KMR8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Gm17535J3KMR8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm17535J3KMR8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm17535J3KMR8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm17535J3KMR8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm17535J3KMR8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm17535J3KMR8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm17535J3KMR8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.75■□□□□ 0.75
Gm17535J3KMR8 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.75■□□□□ 0.75
Gm17535J3KMR8 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.75■□□□□ 0.75
Gm17535J3KMR8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.75■□□□□ 0.75
Gm17535J3KMR8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm17535J3KMR8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Gm17535J3KMR8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.73■□□□□ 0.75
Gm17535J3KMR8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm17535J3KMR8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.73■□□□□ 0.75
Gm17535J3KMR8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.73■□□□□ 0.75
Gm17535J3KMR8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm17535J3KMR8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm17535J3KMR8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm17535J3KMR8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm17535J3KMR8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.73■□□□□ 0.75
Gm17535J3KMR8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17535J3KMR8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17535J3KMR8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.72■□□□□ 0.75
Gm17535J3KMR8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17535J3KMR8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17535J3KMR8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17535J3KMR8 Gm2399-201ENSMUST00000104944 225 ntBASIC19.72■□□□□ 0.75
Gm17535J3KMR8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17535J3KMR8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17535J3KMR8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17535J3KMR8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17535J3KMR8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17535J3KMR8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms