Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdh1F7BJK1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdh1F7BJK1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdh1F7BJK1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh1F7BJK1 Gm43137-201ENSMUST00000198052 594 ntBASIC16.65■□□□□ 0.26
Pcdh1F7BJK1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdh1F7BJK1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Pcdh1F7BJK1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdh1F7BJK1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh1F7BJK1 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.65■□□□□ 0.26
Pcdh1F7BJK1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh1F7BJK1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh1F7BJK1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Pcdh1F7BJK1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdh1F7BJK1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh1F7BJK1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh1F7BJK1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh1F7BJK1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdh1F7BJK1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh1F7BJK1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh1F7BJK1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.64■□□□□ 0.25
Pcdh1F7BJK1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh1F7BJK1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh1F7BJK1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdh1F7BJK1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh1F7BJK1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh1F7BJK1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh1F7BJK1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh1F7BJK1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdh1F7BJK1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh1F7BJK1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.61■□□□□ 0.25
Pcdh1F7BJK1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Pcdh1F7BJK1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Smad6-203ENSMUST00000179458 273 ntBASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms