Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ube4aE9Q735 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ube4aE9Q735 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Ube4aE9Q735 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ube4aE9Q735 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Ube4aE9Q735 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ube4aE9Q735 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.39■■□□□ 1.18
Ube4aE9Q735 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.18
Ube4aE9Q735 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Ube4aE9Q735 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC22.39■■□□□ 1.17
Ube4aE9Q735 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC22.39■■□□□ 1.17
Ube4aE9Q735 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ube4aE9Q735 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ube4aE9Q735 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ube4aE9Q735 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ube4aE9Q735 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.38■■□□□ 1.17
Ube4aE9Q735 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ube4aE9Q735 AL672049.1-201ENSMUST00000197943 91 ntBASIC22.38■■□□□ 1.17
Ube4aE9Q735 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ube4aE9Q735 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ube4aE9Q735 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ube4aE9Q735 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ube4aE9Q735 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Ube4aE9Q735 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
Ube4aE9Q735 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ube4aE9Q735 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Ube4aE9Q735 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC22.38■■□□□ 1.17
Ube4aE9Q735 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ube4aE9Q735 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ube4aE9Q735 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ube4aE9Q735 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ube4aE9Q735 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ube4aE9Q735 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ube4aE9Q735 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ube4aE9Q735 CT010444.2-201ENSMUST00000217877 1629 ntBASIC22.37■■□□□ 1.17
Ube4aE9Q735 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Ube4aE9Q735 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Ube4aE9Q735 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ube4aE9Q735 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC22.36■■□□□ 1.17
Ube4aE9Q735 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ube4aE9Q735 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ube4aE9Q735 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ube4aE9Q735 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ube4aE9Q735 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ube4aE9Q735 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ube4aE9Q735 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Ube4aE9Q735 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.35■■□□□ 1.17
Ube4aE9Q735 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Ube4aE9Q735 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC22.35■■□□□ 1.17
Ube4aE9Q735 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ube4aE9Q735 Mtag2-201ENSMUST00000058665 714 ntBASIC22.35■■□□□ 1.17
Ube4aE9Q735 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ube4aE9Q735 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ube4aE9Q735 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ube4aE9Q735 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ube4aE9Q735 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ube4aE9Q735 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ube4aE9Q735 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Ube4aE9Q735 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ube4aE9Q735 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Ube4aE9Q735 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ube4aE9Q735 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ube4aE9Q735 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC22.33■■□□□ 1.17
Ube4aE9Q735 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC22.33■■□□□ 1.17
Ube4aE9Q735 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC22.33■■□□□ 1.17
Ube4aE9Q735 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ube4aE9Q735 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ube4aE9Q735 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ube4aE9Q735 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ube4aE9Q735 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Ube4aE9Q735 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Ube4aE9Q735 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Ube4aE9Q735 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ube4aE9Q735 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC22.31■■□□□ 1.16
Ube4aE9Q735 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Ube4aE9Q735 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ube4aE9Q735 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ube4aE9Q735 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ube4aE9Q735 AC158538.1-201ENSMUST00000225870 294 ntBASIC22.31■■□□□ 1.16
Ube4aE9Q735 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ube4aE9Q735 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ube4aE9Q735 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.31■■□□□ 1.16
Ube4aE9Q735 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ube4aE9Q735 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ube4aE9Q735 Gm37805-201ENSMUST00000192612 1094 ntBASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms