Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh17E9PXF0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh17E9PXF0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh17E9PXF0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh17E9PXF0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh17E9PXF0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh17E9PXF0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh17E9PXF0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdh17E9PXF0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
Pcdh17E9PXF0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh17E9PXF0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh17E9PXF0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh17E9PXF0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh17E9PXF0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdh17E9PXF0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdh17E9PXF0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh17E9PXF0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Gm12896-201ENSMUST00000118430 226 ntBASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Gm27275-201ENSMUST00000184318 272 ntBASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdh17E9PXF0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdh17E9PXF0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdh17E9PXF0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh17E9PXF0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh17E9PXF0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh17E9PXF0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh17E9PXF0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh17E9PXF0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Pcdh17E9PXF0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh17E9PXF0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh17E9PXF0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh17E9PXF0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh17E9PXF0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh17E9PXF0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh17E9PXF0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh17E9PXF0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Pcdh17E9PXF0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms