Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc38A3KMP2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc38A3KMP2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Ttc38A3KMP2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc38A3KMP2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc38A3KMP2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc38A3KMP2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc38A3KMP2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc38A3KMP2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.19■□□□□ 0.82
Ttc38A3KMP2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.19■□□□□ 0.82
Ttc38A3KMP2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc38A3KMP2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.19■□□□□ 0.82
Ttc38A3KMP2 Gm6420-201ENSMUST00000193885 723 ntBASIC20.19■□□□□ 0.82
Ttc38A3KMP2 Gm7514-201ENSMUST00000209475 934 ntBASIC20.19■□□□□ 0.82
Ttc38A3KMP2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc38A3KMP2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc38A3KMP2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ttc38A3KMP2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ttc38A3KMP2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ttc38A3KMP2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ttc38A3KMP2 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.18■□□□□ 0.82
Ttc38A3KMP2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.18■□□□□ 0.82
Ttc38A3KMP2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ttc38A3KMP2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc38A3KMP2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc38A3KMP2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc38A3KMP2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc38A3KMP2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc38A3KMP2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc38A3KMP2 Nespas-201ENSMUST00000143738 1083 ntBASIC20.17■□□□□ 0.82
Ttc38A3KMP2 AV356131-201ENSMUST00000206201 750 ntBASIC20.17■□□□□ 0.82
Ttc38A3KMP2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc38A3KMP2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc38A3KMP2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc38A3KMP2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc38A3KMP2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ttc38A3KMP2 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.16■□□□□ 0.82
Ttc38A3KMP2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.16■□□□□ 0.82
Ttc38A3KMP2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ttc38A3KMP2 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.16■□□□□ 0.82
Ttc38A3KMP2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ttc38A3KMP2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ttc38A3KMP2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Ttc38A3KMP2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc38A3KMP2 Gm26571-201ENSMUST00000181399 666 ntBASIC20.15■□□□□ 0.82
Ttc38A3KMP2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc38A3KMP2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc38A3KMP2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc38A3KMP2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.15■□□□□ 0.82
Ttc38A3KMP2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc38A3KMP2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc38A3KMP2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc38A3KMP2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc38A3KMP2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc38A3KMP2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc38A3KMP2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Ttc38A3KMP2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc38A3KMP2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc38A3KMP2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc38A3KMP2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.14■□□□□ 0.81
Ttc38A3KMP2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc38A3KMP2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.14■□□□□ 0.81
Ttc38A3KMP2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc38A3KMP2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ttc38A3KMP2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc38A3KMP2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc38A3KMP2 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.13■□□□□ 0.81
Ttc38A3KMP2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Ttc38A3KMP2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc38A3KMP2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.13■□□□□ 0.81
Ttc38A3KMP2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc38A3KMP2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc38A3KMP2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc38A3KMP2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ttc38A3KMP2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc38A3KMP2 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.13■□□□□ 0.81
Ttc38A3KMP2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc38A3KMP2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc38A3KMP2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ttc38A3KMP2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ttc38A3KMP2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ttc38A3KMP2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ttc38A3KMP2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ttc38A3KMP2 Gm10849-201ENSMUST00000100397 618 ntBASIC20.11■□□□□ 0.81
Ttc38A3KMP2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ttc38A3KMP2 Gm8495-201ENSMUST00000188740 694 ntBASIC20.11■□□□□ 0.81
Ttc38A3KMP2 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.11■□□□□ 0.81
Ttc38A3KMP2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ttc38A3KMP2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ttc38A3KMP2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ttc38A3KMP2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.1■□□□□ 0.81
Ttc38A3KMP2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc38A3KMP2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc38A3KMP2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ttc38A3KMP2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc38A3KMP2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc38A3KMP2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc38A3KMP2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc38A3KMP2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ttc38A3KMP2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms