Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn3aA2ASI5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.83■□□□□ 0.92
Scn3aA2ASI5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn3aA2ASI5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn3aA2ASI5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.81■□□□□ 0.92
Scn3aA2ASI5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn3aA2ASI5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn3aA2ASI5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn3aA2ASI5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn3aA2ASI5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.81■□□□□ 0.92
Scn3aA2ASI5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scn3aA2ASI5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.81■□□□□ 0.92
Scn3aA2ASI5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.8■□□□□ 0.92
Scn3aA2ASI5 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.8■□□□□ 0.92
Scn3aA2ASI5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Scn3aA2ASI5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn3aA2ASI5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Scn3aA2ASI5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Scn3aA2ASI5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Scn3aA2ASI5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn3aA2ASI5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Scn3aA2ASI5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn3aA2ASI5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.79■□□□□ 0.92
Scn3aA2ASI5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn3aA2ASI5 Gm6576-201ENSMUST00000169678 883 ntBASIC20.79■□□□□ 0.92
Scn3aA2ASI5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.79■□□□□ 0.92
Scn3aA2ASI5 Mir6982-201ENSMUST00000184354 68 ntBASIC20.79■□□□□ 0.92
Scn3aA2ASI5 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.79■□□□□ 0.92
Scn3aA2ASI5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.79■□□□□ 0.92
Scn3aA2ASI5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn3aA2ASI5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn3aA2ASI5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn3aA2ASI5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn3aA2ASI5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.78■□□□□ 0.92
Scn3aA2ASI5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn3aA2ASI5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn3aA2ASI5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn3aA2ASI5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Scn3aA2ASI5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn3aA2ASI5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.78■□□□□ 0.92
Scn3aA2ASI5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn3aA2ASI5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn3aA2ASI5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn3aA2ASI5 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.77■□□□□ 0.92
Scn3aA2ASI5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn3aA2ASI5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn3aA2ASI5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn3aA2ASI5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Scn3aA2ASI5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.77■□□□□ 0.92
Scn3aA2ASI5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn3aA2ASI5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn3aA2ASI5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn3aA2ASI5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scn3aA2ASI5 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scn3aA2ASI5 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.76■□□□□ 0.91
Scn3aA2ASI5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn3aA2ASI5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn3aA2ASI5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn3aA2ASI5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn3aA2ASI5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Scn3aA2ASI5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.76■□□□□ 0.91
Scn3aA2ASI5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.76■□□□□ 0.91
Scn3aA2ASI5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn3aA2ASI5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.76■□□□□ 0.91
Scn3aA2ASI5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.76■□□□□ 0.91
Scn3aA2ASI5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn3aA2ASI5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn3aA2ASI5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn3aA2ASI5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.76■□□□□ 0.91
Scn3aA2ASI5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn3aA2ASI5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn3aA2ASI5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.75■□□□□ 0.91
Scn3aA2ASI5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.75■□□□□ 0.91
Scn3aA2ASI5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn3aA2ASI5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Scn3aA2ASI5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn3aA2ASI5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Scn3aA2ASI5 Gm37055-201ENSMUST00000191866 133 ntBASIC20.74■□□□□ 0.91
Scn3aA2ASI5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.74■□□□□ 0.91
Scn3aA2ASI5 Gm18025-201ENSMUST00000221733 862 ntBASIC20.74■□□□□ 0.91
Scn3aA2ASI5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn3aA2ASI5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn3aA2ASI5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scn3aA2ASI5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn3aA2ASI5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scn3aA2ASI5 Mir5122-201ENSMUST00000175004 89 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms