Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IsxA1A546 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.2■□□□□ 0.34
IsxA1A546 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IsxA1A546 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IsxA1A546 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
IsxA1A546 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
IsxA1A546 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IsxA1A546 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IsxA1A546 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IsxA1A546 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IsxA1A546 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
IsxA1A546 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.19■□□□□ 0.34
IsxA1A546 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IsxA1A546 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
IsxA1A546 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IsxA1A546 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IsxA1A546 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IsxA1A546 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IsxA1A546 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IsxA1A546 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
IsxA1A546 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IsxA1A546 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IsxA1A546 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.19■□□□□ 0.34
IsxA1A546 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.19■□□□□ 0.34
IsxA1A546 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
IsxA1A546 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IsxA1A546 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
IsxA1A546 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IsxA1A546 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
IsxA1A546 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
IsxA1A546 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
IsxA1A546 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IsxA1A546 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IsxA1A546 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IsxA1A546 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.18■□□□□ 0.34
IsxA1A546 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IsxA1A546 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.18■□□□□ 0.34
IsxA1A546 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.18■□□□□ 0.34
IsxA1A546 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
IsxA1A546 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
IsxA1A546 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IsxA1A546 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IsxA1A546 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IsxA1A546 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
IsxA1A546 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.18■□□□□ 0.34
IsxA1A546 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IsxA1A546 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IsxA1A546 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
IsxA1A546 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
IsxA1A546 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
IsxA1A546 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
IsxA1A546 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IsxA1A546 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IsxA1A546 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IsxA1A546 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IsxA1A546 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
IsxA1A546 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.16■□□□□ 0.34
IsxA1A546 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.16■□□□□ 0.34
IsxA1A546 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.16■□□□□ 0.34
IsxA1A546 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IsxA1A546 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IsxA1A546 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IsxA1A546 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
IsxA1A546 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IsxA1A546 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.16■□□□□ 0.34
IsxA1A546 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IsxA1A546 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IsxA1A546 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
IsxA1A546 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IsxA1A546 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
IsxA1A546 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IsxA1A546 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.15■□□□□ 0.34
IsxA1A546 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
IsxA1A546 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
IsxA1A546 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
IsxA1A546 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IsxA1A546 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IsxA1A546 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IsxA1A546 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IsxA1A546 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IsxA1A546 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IsxA1A546 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.14■□□□□ 0.33
IsxA1A546 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IsxA1A546 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IsxA1A546 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IsxA1A546 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms