Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-1A0N8R0 Gm11421-201ENSMUST00000122124 294 ntBASIC14.91□□□□□ -0.02
Trav12d-1A0N8R0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav12d-1A0N8R0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-1A0N8R0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav12d-1A0N8R0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav12d-1A0N8R0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-1A0N8R0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
Trav12d-1A0N8R0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-1A0N8R0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-1A0N8R0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-1A0N8R0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-1A0N8R0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trav12d-1A0N8R0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Gm12251-201ENSMUST00000117893 792 ntBASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Gm27801-201ENSMUST00000184174 223 ntBASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-1A0N8R0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-1A0N8R0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Smad6-203ENSMUST00000179458 273 ntBASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-1A0N8R0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav12d-1A0N8R0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-1A0N8R0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-1A0N8R0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav12d-1A0N8R0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-1A0N8R0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-1A0N8R0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-1A0N8R0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-1A0N8R0 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.87□□□□□ -0.03
Trav12d-1A0N8R0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-1A0N8R0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.87□□□□□ -0.03
Trav12d-1A0N8R0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav12d-1A0N8R0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-1A0N8R0 Gm9847-201ENSMUST00000052528 599 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms