Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3854A0A1B0GSS6 Mir1199-201ENSMUST00000117015 119 ntBASIC18.58■□□□□ 0.56
Gm3854A0A1B0GSS6 Gm15565-201ENSMUST00000118890 427 ntBASIC18.58■□□□□ 0.56
Gm3854A0A1B0GSS6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.58■□□□□ 0.56
Gm3854A0A1B0GSS6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3854A0A1B0GSS6 Gm37055-201ENSMUST00000191866 133 ntBASIC18.58■□□□□ 0.56
Gm3854A0A1B0GSS6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.58■□□□□ 0.56
Gm3854A0A1B0GSS6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3854A0A1B0GSS6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3854A0A1B0GSS6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3854A0A1B0GSS6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3854A0A1B0GSS6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Gm3854A0A1B0GSS6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3854A0A1B0GSS6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Gm11927-201ENSMUST00000118472 759 ntBASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3854A0A1B0GSS6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Gm3854A0A1B0GSS6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3854A0A1B0GSS6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Gm3854A0A1B0GSS6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.56■□□□□ 0.56
Gm3854A0A1B0GSS6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.56■□□□□ 0.56
Gm3854A0A1B0GSS6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.56■□□□□ 0.56
Gm3854A0A1B0GSS6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3854A0A1B0GSS6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3854A0A1B0GSS6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3854A0A1B0GSS6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3854A0A1B0GSS6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3854A0A1B0GSS6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3854A0A1B0GSS6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.55■□□□□ 0.56
Gm3854A0A1B0GSS6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.55■□□□□ 0.56
Gm3854A0A1B0GSS6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm3854A0A1B0GSS6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.55■□□□□ 0.56
Gm3854A0A1B0GSS6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3854A0A1B0GSS6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3854A0A1B0GSS6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gm3854A0A1B0GSS6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3854A0A1B0GSS6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3854A0A1B0GSS6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3854A0A1B0GSS6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3854A0A1B0GSS6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3854A0A1B0GSS6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3854A0A1B0GSS6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3854A0A1B0GSS6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.52■□□□□ 0.56
Gm3854A0A1B0GSS6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.52■□□□□ 0.56
Gm3854A0A1B0GSS6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3854A0A1B0GSS6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm3854A0A1B0GSS6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm3854A0A1B0GSS6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3854A0A1B0GSS6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gm3854A0A1B0GSS6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3854A0A1B0GSS6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gm3854A0A1B0GSS6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms