Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc194A0A140LIT1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc194A0A140LIT1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc194A0A140LIT1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ccdc194A0A140LIT1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc194A0A140LIT1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ccdc194A0A140LIT1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc194A0A140LIT1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc194A0A140LIT1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc194A0A140LIT1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc194A0A140LIT1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc194A0A140LIT1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc194A0A140LIT1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc194A0A140LIT1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc194A0A140LIT1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc194A0A140LIT1 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.42■□□□□ 0.54
Ccdc194A0A140LIT1 Gm43060-201ENSMUST00000200621 289 ntBASIC18.42■□□□□ 0.54
Ccdc194A0A140LIT1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.42■□□□□ 0.54
Ccdc194A0A140LIT1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.42■□□□□ 0.54
Ccdc194A0A140LIT1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc194A0A140LIT1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc194A0A140LIT1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc194A0A140LIT1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Ccdc194A0A140LIT1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc194A0A140LIT1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc194A0A140LIT1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Ccdc194A0A140LIT1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms