Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43060-201ENSMUST00000200621 289 ntBASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.23■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.23■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms