Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-27A0A0G2JF28 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-27A0A0G2JF28 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-27A0A0G2JF28 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-27A0A0G2JF28 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-27A0A0G2JF28 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-27A0A0G2JF28 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv8-27A0A0G2JF28 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Igkv8-27A0A0G2JF28 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv8-27A0A0G2JF28 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Igkv8-27A0A0G2JF28 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Igkv8-27A0A0G2JF28 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 Gm43294-201ENSMUST00000202850 2490 ntBASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 Gm38308-201ENSMUST00000194934 1809 ntBASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv8-27A0A0G2JF28 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv8-27A0A0G2JF28 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv8-27A0A0G2JF28 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms