Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-4A0A0B4J1K2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 BC021767-201ENSMUST00000126387 1716 ntBASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-4A0A0B4J1K2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trav9-4A0A0B4J1K2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gm7291-201ENSMUST00000199147 382 ntBASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav9-4A0A0B4J1K2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms