Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv2A0A0B4J1G8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Trbv2A0A0B4J1G8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv2A0A0B4J1G8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trbv2A0A0B4J1G8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv2A0A0B4J1G8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv2A0A0B4J1G8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv2A0A0B4J1G8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Trbv2A0A0B4J1G8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv2A0A0B4J1G8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbv2A0A0B4J1G8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv2A0A0B4J1G8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Gm12251-201ENSMUST00000117893 792 ntBASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv2A0A0B4J1G8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv2A0A0B4J1G8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Gm43137-201ENSMUST00000198052 594 ntBASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv2A0A0B4J1G8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Gm27801-201ENSMUST00000184174 223 ntBASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms