Protein–RNA interactions for Protein: A0A0A6YYE5

Igkv4-78, Immunoglobulin kappa variable 4-78 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-78A0A0A6YYE5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Spcs1-204ENSMUST00000226782 949 ntBASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.1□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Igkv4-78A0A0A6YYE5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv4-78A0A0A6YYE5 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.08□□□□□ -0.32
Igkv4-78A0A0A6YYE5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv4-78A0A0A6YYE5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv4-78A0A0A6YYE5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms