Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Gm13158-201ENSMUST00000122007 736 ntBASIC17.15■□□□□ 0.34
Ighv1-42A0A0A6YY38 Gm22325-201ENSMUST00000158904 308 ntBASIC17.15■□□□□ 0.34
Ighv1-42A0A0A6YY38 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.15■□□□□ 0.34
Ighv1-42A0A0A6YY38 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ighv1-42A0A0A6YY38 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-42A0A0A6YY38 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-42A0A0A6YY38 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.15■□□□□ 0.34
Ighv1-42A0A0A6YY38 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-42A0A0A6YY38 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-42A0A0A6YY38 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ighv1-42A0A0A6YY38 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-42A0A0A6YY38 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-42A0A0A6YY38 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ighv1-42A0A0A6YY38 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-42A0A0A6YY38 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-42A0A0A6YY38 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-42A0A0A6YY38 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-42A0A0A6YY38 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-42A0A0A6YY38 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-42A0A0A6YY38 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-42A0A0A6YY38 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.14■□□□□ 0.33
Ighv1-42A0A0A6YY38 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-42A0A0A6YY38 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-42A0A0A6YY38 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-42A0A0A6YY38 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-42A0A0A6YY38 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-42A0A0A6YY38 Iqck-206ENSMUST00000208658 2891 ntBASIC17.14■□□□□ 0.33
Ighv1-42A0A0A6YY38 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-42A0A0A6YY38 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-42A0A0A6YY38 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-42A0A0A6YY38 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-42A0A0A6YY38 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-42A0A0A6YY38 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-42A0A0A6YY38 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv1-42A0A0A6YY38 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-42A0A0A6YY38 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.13■□□□□ 0.33
Ighv1-42A0A0A6YY38 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-42A0A0A6YY38 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ighv1-42A0A0A6YY38 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-42A0A0A6YY38 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-42A0A0A6YY38 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Gm15378-201ENSMUST00000121894 207 ntBASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Gm6576-201ENSMUST00000169678 883 ntBASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-42A0A0A6YY38 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 Gm11927-201ENSMUST00000118472 759 ntBASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-42A0A0A6YY38 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 Gm10698-201ENSMUST00000182663 604 ntBASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-42A0A0A6YY38 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-42A0A0A6YY38 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-42A0A0A6YY38 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.09■□□□□ 0.33
Ighv1-42A0A0A6YY38 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.09■□□□□ 0.33
Ighv1-42A0A0A6YY38 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ighv1-42A0A0A6YY38 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ighv1-42A0A0A6YY38 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-42A0A0A6YY38 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-42A0A0A6YY38 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms