Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gm2399-201ENSMUST00000104944 225 ntBASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.11■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.11■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gm22325-201ENSMUST00000158904 308 ntBASIC17.11■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gm11249-201ENSMUST00000117071 859 ntBASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gm5643-201ENSMUST00000117081 966 ntBASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gm10812-201ENSMUST00000099864 546 ntBASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.09■□□□□ 0.33
Ighv1-43A0A0A6YXN5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.09■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ighv1-43A0A0A6YXN5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.08■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.08■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.08■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.08■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.08■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Flg-201ENSMUST00000050758 1488 ntBASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Gm18666-201ENSMUST00000190039 958 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms