Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav9d-1A0A075B699 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.3□□□□□ -0.12
Trav9d-1A0A075B699 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav9d-1A0A075B699 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-1A0A075B699 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Trav9d-1A0A075B699 Gm45417-201ENSMUST00000209533 758 ntBASIC14.3□□□□□ -0.12
Trav9d-1A0A075B699 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-1A0A075B699 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-1A0A075B699 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-1A0A075B699 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-1A0A075B699 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav9d-1A0A075B699 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-1A0A075B699 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-1A0A075B699 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-1A0A075B699 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-1A0A075B699 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Gm6139-201ENSMUST00000079261 882 ntBASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-1A0A075B699 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-1A0A075B699 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.27□□□□□ -0.12
Trav9d-1A0A075B699 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-1A0A075B699 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.27□□□□□ -0.12
Trav9d-1A0A075B699 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-1A0A075B699 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-1A0A075B699 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-1A0A075B699 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-1A0A075B699 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-1A0A075B699 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav9d-1A0A075B699 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav9d-1A0A075B699 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Gm43017-201ENSMUST00000198296 752 ntBASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms