Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Gm45102-201ENSMUST00000207427 857 ntBASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Gm12922-201ENSMUST00000120626 809 ntBASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Gm7860-201ENSMUST00000121190 879 ntBASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Spcs1-204ENSMUST00000226782 949 ntBASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Rps24-207ENSMUST00000224568 714 ntBASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms