Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav4d-3A0A075B625 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Gm14523-201ENSMUST00000117260 558 ntBASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Gm16464-201ENSMUST00000117815 1095 ntBASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4d-3A0A075B625 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4d-3A0A075B625 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms