Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4n-4A0A075B615 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Gm11687-201ENSMUST00000118911 886 ntBASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4n-4A0A075B615 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4n-4A0A075B615 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4n-4A0A075B615 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4n-4A0A075B615 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms