Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.26■□□□□ 0.35
Trav1A0A075B5Z4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav1A0A075B5Z4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav1A0A075B5Z4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trav1A0A075B5Z4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav1A0A075B5Z4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav1A0A075B5Z4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav1A0A075B5Z4 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.26■□□□□ 0.35
Trav1A0A075B5Z4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav1A0A075B5Z4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav1A0A075B5Z4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav1A0A075B5Z4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trav1A0A075B5Z4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 Gm13234-201ENSMUST00000120010 747 ntBASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav1A0A075B5Z4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav1A0A075B5Z4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav1A0A075B5Z4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Trav1A0A075B5Z4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav1A0A075B5Z4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav1A0A075B5Z4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav1A0A075B5Z4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav1A0A075B5Z4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav1A0A075B5Z4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav1A0A075B5Z4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav1A0A075B5Z4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav1A0A075B5Z4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav1A0A075B5Z4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Trav1A0A075B5Z4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav1A0A075B5Z4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.22■□□□□ 0.35
Trav1A0A075B5Z4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav1A0A075B5Z4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.22■□□□□ 0.35
Trav1A0A075B5Z4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Trav1A0A075B5Z4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav1A0A075B5Z4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav1A0A075B5Z4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav1A0A075B5Z4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav1A0A075B5Z4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav1A0A075B5Z4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav1A0A075B5Z4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav1A0A075B5Z4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav1A0A075B5Z4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav1A0A075B5Z4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav1A0A075B5Z4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav1A0A075B5Z4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.21■□□□□ 0.35
Trav1A0A075B5Z4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav1A0A075B5Z4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav1A0A075B5Z4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav1A0A075B5Z4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav1A0A075B5Z4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav1A0A075B5Z4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav1A0A075B5Z4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trav1A0A075B5Z4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav1A0A075B5Z4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav1A0A075B5Z4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.2■□□□□ 0.34
Trav1A0A075B5Z4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trav1A0A075B5Z4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav1A0A075B5Z4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trav1A0A075B5Z4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav1A0A075B5Z4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav1A0A075B5Z4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav1A0A075B5Z4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav1A0A075B5Z4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav1A0A075B5Z4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Trav1A0A075B5Z4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav1A0A075B5Z4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav1A0A075B5Z4 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.19■□□□□ 0.34
Trav1A0A075B5Z4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms