Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Ppp4r1l-ps-205ENSMUST00000141051 4466 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Adgrl3-213ENSMUST00000120292 5026 ntTSL 5 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm5390-201ENSMUST00000119069 1230 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm11257-201ENSMUST00000121313 315 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm24826-202ENSMUST00000197298 216 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 AC154515.3-201ENSMUST00000225081 1159 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Fam161b-201ENSMUST00000021659 3357 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Arhgef7-202ENSMUST00000074856 4451 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm21043-201ENSMUST00000199316 1517 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm37372-201ENSMUST00000193577 3311 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Cacna1c-213ENSMUST00000188078 6519 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Cacna1c-217ENSMUST00000188865 6519 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm38315-201ENSMUST00000194286 2437 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 AC165260.6-204ENSMUST00000225571 3508 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Tshz2-201ENSMUST00000109157 5083 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Trpm1-218ENSMUST00000206277 5076 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 AC154522.1-201ENSMUST00000224647 1903 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm7651-201ENSMUST00000173398 901 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Mir6241-201ENSMUST00000184225 103 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Ighv1-29-201ENSMUST00000194116 342 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Gm19047-201ENSMUST00000220922 1099 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 AC160114.2-201ENSMUST00000223021 300 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 n-R5s29-201ENSMUST00000082836 119 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Tfcp2l1-201ENSMUST00000027629 9269 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cacna1fQ9JIS7 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Wipf3-206ENSMUST00000172046 4204 ntAPPRIS P4 TSL 5 BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Gm38302-201ENSMUST00000191676 2076 ntBASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Ccnd2-201ENSMUST00000000188 6330 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cacna1fQ9JIS7 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms