Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Gm22660-201ENSMUST00000104193 130 ntBASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Gm11622-201ENSMUST00000120525 691 ntBASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Gm43542-201ENSMUST00000199505 379 ntBASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Gm7478-201ENSMUST00000201054 581 ntBASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Gm18995-201ENSMUST00000202981 520 ntBASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 AC165349.2-201ENSMUST00000219097 426 ntBASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 AC154785.1-201ENSMUST00000223280 572 ntBASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 AC129537.1-202ENSMUST00000226619 430 ntBASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chmp4bQ9D8B3 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm45251-201ENSMUST00000209486 1465 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm37403-201ENSMUST00000193775 3521 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm7842-201ENSMUST00000217691 1379 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm16221-201ENSMUST00000117331 393 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm14891-201ENSMUST00000117378 596 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm16056-201ENSMUST00000119293 135 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm12499-201ENSMUST00000121961 546 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm11838-201ENSMUST00000121999 231 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm1947-201ENSMUST00000122451 910 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Mir1962-201ENSMUST00000157516 121 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm25455-201ENSMUST00000157946 325 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm24530-201ENSMUST00000157948 288 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm20702-201ENSMUST00000176181 460 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm6931-201ENSMUST00000183103 371 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm8304-201ENSMUST00000185744 584 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm42472-201ENSMUST00000201626 859 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm18292-201ENSMUST00000216673 919 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 AL590616.1-201ENSMUST00000223339 574 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 AC069562.1-201ENSMUST00000224206 434 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Gm44228-201ENSMUST00000204888 2026 ntBASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Chmp4bQ9D8B3 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gm26014-201ENSMUST00000104405 132 ntBASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gm15730-201ENSMUST00000121828 415 ntBASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gm8893-201ENSMUST00000172146 1242 ntBASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gm22408-201ENSMUST00000174925 65 ntBASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gm8004-201ENSMUST00000187782 617 ntBASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gm42424-201ENSMUST00000198319 376 ntBASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 AC130673.1-201ENSMUST00000227992 435 ntBASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms