Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Mir675-201ENSMUST00000102320 84 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm14749-201ENSMUST00000121269 333 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm24347-201ENSMUST00000158711 142 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm3611-201ENSMUST00000173687 877 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm27972-201ENSMUST00000184720 137 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm43023-201ENSMUST00000197583 2106 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm43008-201ENSMUST00000202346 286 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Zfp389-202ENSMUST00000224437 1234 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 AC163038.4-201ENSMUST00000224942 474 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 AC207128.1-201ENSMUST00000225928 799 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm18632-201ENSMUST00000222597 2087 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 AC183268.1-201ENSMUST00000215753 2837 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC6.02□□□□□ -1.44
Nup35Q8R4R6 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 AC166341.5-201ENSMUST00000222206 1400 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm16409-201ENSMUST00000100510 747 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm24195-201ENSMUST00000116804 137 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm4918-201ENSMUST00000119420 1084 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm9143-201ENSMUST00000120745 745 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm8172-201ENSMUST00000120762 750 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms