Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm14667-201ENSMUST00000119448 1350 ntBASIC8.9□□□□□ -0.98
Vps53Q8CCB4 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Gm22152-201ENSMUST00000116966 125 ntBASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Gm8215-201ENSMUST00000120627 990 ntBASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Gm16407-201ENSMUST00000122134 567 ntBASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Gm5181-201ENSMUST00000183140 971 ntBASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Gm29496-201ENSMUST00000189854 693 ntBASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Zfp874a-208ENSMUST00000225479 1092 ntBASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Vps53Q8CCB4 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Vps53Q8CCB4 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Vps53Q8CCB4 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC8.9□□□□□ -0.99
Vps53Q8CCB4 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Vps53Q8CCB4 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.9□□□□□ -0.99
Vps53Q8CCB4 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.9□□□□□ -0.99
Vps53Q8CCB4 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Vps53Q8CCB4 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.99
Vps53Q8CCB4 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Vps53Q8CCB4 Gm44187-201ENSMUST00000204735 1929 ntBASIC8.9□□□□□ -0.99
Vps53Q8CCB4 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Vps53Q8CCB4 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Vps53Q8CCB4 Gm6729-201ENSMUST00000165173 1452 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Gm44165-201ENSMUST00000203093 1469 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 AC126251.1-201ENSMUST00000228170 2707 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Gm38331-201ENSMUST00000195719 2671 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Gm45360-201ENSMUST00000210698 1405 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Gm7647-201ENSMUST00000200996 1389 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 CT571245.1-201ENSMUST00000218642 3465 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Gm12365-201ENSMUST00000117931 568 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Gm15665-201ENSMUST00000119116 847 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Gm22847-201ENSMUST00000157707 105 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Gm27782-201ENSMUST00000185059 199 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 AC118006.3-201ENSMUST00000223948 1176 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 AC126939.4-201ENSMUST00000225360 743 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 CT009711.1-201ENSMUST00000223992 3040 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Gm44249-201ENSMUST00000204538 1805 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Gm45528-201ENSMUST00000209854 3145 ntBASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Vps53Q8CCB4 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm37283-201ENSMUST00000193111 1571 ntBASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 138.1 ms