Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Usp47Q8BY87 Gm37706-201ENSMUST00000195379 2765 ntBASIC10.58□□□□□ -0.72
Usp47Q8BY87 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Usp47Q8BY87 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Usp47Q8BY87 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Usp47Q8BY87 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Usp47Q8BY87 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Usp47Q8BY87 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Usp47Q8BY87 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 AC164433.1-201ENSMUST00000226138 1544 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Klf10-202ENSMUST00000226363 2917 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Usp47Q8BY87 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Gm13744-201ENSMUST00000118953 850 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 Gm15842-201ENSMUST00000120513 618 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Gm5147-201ENSMUST00000185999 794 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 Gm42584-201ENSMUST00000201404 220 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 AV026068-229ENSMUST00000225516 595 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Gm25189-201ENSMUST00000083911 164 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Usp47Q8BY87 AC155270.1-201ENSMUST00000221626 4028 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 Klf5-202ENSMUST00000226784 2852 ntBASIC10.57□□□□□ -0.72
Usp47Q8BY87 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Usp47Q8BY87 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC10.57□□□□□ -0.72
Usp47Q8BY87 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Usp47Q8BY87 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm14279-201ENSMUST00000117142 332 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm10243-201ENSMUST00000117571 333 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm5255-201ENSMUST00000120125 642 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm43203-201ENSMUST00000200130 558 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm18562-201ENSMUST00000209949 915 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm7943-201ENSMUST00000212078 1034 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm6581-201ENSMUST00000214545 260 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC10.56□□□□□ -0.72
Usp47Q8BY87 CT030182.4-201ENSMUST00000223647 645 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 AC122309.1-201ENSMUST00000226945 421 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm22504-201ENSMUST00000082963 139 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm10247-201ENSMUST00000090395 333 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm14035-201ENSMUST00000117596 1475 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Gm18726-201ENSMUST00000218175 2010 ntBASIC10.56□□□□□ -0.72
Usp47Q8BY87 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Usp47Q8BY87 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Usp47Q8BY87 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms