Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm16072-201ENSMUST00000119574 2377 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Mei1-203ENSMUST00000188048 3197 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 AC154828.1-201ENSMUST00000220696 2810 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC9.61□□□□□ -0.87
Smarcc1P97496 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC9.61□□□□□ -0.87
Smarcc1P97496 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Smarcc1P97496 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm37978-201ENSMUST00000194736 2915 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm13229-201ENSMUST00000118238 340 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm5133-201ENSMUST00000118940 1255 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm9378-201ENSMUST00000120315 471 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm12929-201ENSMUST00000122406 370 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm25660-201ENSMUST00000158470 104 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm29369-201ENSMUST00000190674 615 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm4856-201ENSMUST00000192696 1091 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm43287-201ENSMUST00000197747 600 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm42883-201ENSMUST00000202594 222 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm45100-201ENSMUST00000209153 391 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC9.61□□□□□ -0.87
Smarcc1P97496 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Smarcc1P97496 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Smarcc1P97496 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Smarcc1P97496 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC9.61□□□□□ -0.87
Smarcc1P97496 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Smarcc1P97496 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smarcc1P97496 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm43839-201ENSMUST00000196183 2325 ntBASIC9.6□□□□□ -0.87
Smarcc1P97496 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Smarcc1P97496 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Smarcc1P97496 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Smarcc1P97496 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm15709-201ENSMUST00000118354 213 ntBASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm12104-201ENSMUST00000120359 979 ntBASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm16357-201ENSMUST00000144091 474 ntBASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC9.6□□□□□ -0.87
Smarcc1P97496 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm29144-201ENSMUST00000189235 339 ntBASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm29238-201ENSMUST00000189709 695 ntBASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm28607-201ENSMUST00000190142 339 ntBASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm28121-201ENSMUST00000191420 339 ntBASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm43147-201ENSMUST00000196944 542 ntBASIC9.6□□□□□ -0.87
Smarcc1P97496 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm8168-201ENSMUST00000209631 948 ntBASIC9.6□□□□□ -0.87
Smarcc1P97496 AC122372.1-201ENSMUST00000215344 280 ntBASIC9.6□□□□□ -0.87
Smarcc1P97496 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Smarcc1P97496 CT009733.1-202ENSMUST00000224941 441 ntBASIC9.6□□□□□ -0.87
Smarcc1P97496 AC154618.2-201ENSMUST00000228299 452 ntBASIC9.6□□□□□ -0.87
Smarcc1P97496 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Smarcc1P97496 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Smarcc1P97496 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC9.6□□□□□ -0.87
Smarcc1P97496 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Smarcc1P97496 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Smarcc1P97496 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 AC091783.1-201ENSMUST00000223614 1613 ntBASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smarcc1P97496 Gm16433-201ENSMUST00000062429 1984 ntBASIC9.59□□□□□ -0.87
Smarcc1P97496 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smarcc1P97496 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smarcc1P97496 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smarcc1P97496 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smarcc1P97496 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC9.59□□□□□ -0.87
Smarcc1P97496 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms