Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hmgb1P63158 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC8.64□□□□□ -1.03
Hmgb1P63158 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Hmgb1P63158 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Hmgb1P63158 Gm5721-201ENSMUST00000119845 1696 ntBASIC8.64□□□□□ -1.03
Hmgb1P63158 Gm42490-201ENSMUST00000198595 2064 ntBASIC8.64□□□□□ -1.03
Hmgb1P63158 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hmgb1P63158 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hmgb1P63158 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Hmgb1P63158 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hmgb1P63158 AC161247.1-201ENSMUST00000217744 2295 ntBASIC8.64□□□□□ -1.03
Hmgb1P63158 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.64□□□□□ -1.03
Hmgb1P63158 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Hmgb1P63158 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hmgb1P63158 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Hmgb1P63158 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Hmgb1P63158 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 AC158595.1-201ENSMUST00000217989 1435 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC8.63□□□□□ -1.03
Hmgb1P63158 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm13854-201ENSMUST00000121183 1679 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 AC125487.2-201ENSMUST00000219810 1300 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm44996-201ENSMUST00000208787 2980 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 CT030159.1-201ENSMUST00000221580 2261 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 CT025642.2-201ENSMUST00000225009 1649 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Hmgb1P63158 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Hmgb1P63158 Zfx-202ENSMUST00000113925 879 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm6027-201ENSMUST00000121467 756 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm21959-201ENSMUST00000178439 452 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm22897-202ENSMUST00000197782 127 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm43247-201ENSMUST00000198638 481 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm18422-201ENSMUST00000203663 1032 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm19039-201ENSMUST00000204363 575 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm6850-201ENSMUST00000210031 530 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm5374-202ENSMUST00000222910 314 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm10123-201ENSMUST00000075723 490 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Mir30c-1-201ENSMUST00000083556 89 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC8.63□□□□□ -1.03
Hmgb1P63158 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Scfd1-205ENSMUST00000219434 2749 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm10773-201ENSMUST00000218071 3935 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hmgb1P63158 Gm44950-201ENSMUST00000206403 2296 ntBASIC8.63□□□□□ -1.03
Hmgb1P63158 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Hmgb1P63158 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.62□□□□□ -1.03
Hmgb1P63158 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 Gm43158-201ENSMUST00000198484 1555 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Hmgb1P63158 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC8.62□□□□□ -1.03
Hmgb1P63158 Gm13532-201ENSMUST00000120373 240 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC8.62□□□□□ -1.03
Hmgb1P63158 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC8.62□□□□□ -1.03
Hmgb1P63158 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC8.62□□□□□ -1.03
Hmgb1P63158 Gm20452-201ENSMUST00000174686 513 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Hmgb1P63158 Scgb2b30-201ENSMUST00000187013 336 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Gm29041-201ENSMUST00000189199 380 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 Gm3142-201ENSMUST00000190107 414 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 Gm28877-201ENSMUST00000191349 604 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 Scgb2b10-201ENSMUST00000191403 318 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 Gm18529-201ENSMUST00000193025 1257 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms