Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rrp1P56183 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rrp1P56183 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Cyp19a1-203ENSMUST00000215736 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Rrp1P56183 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm37534-201ENSMUST00000194483 5222 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm14509-201ENSMUST00000117312 1286 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Gm12075-201ENSMUST00000117426 397 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm12361-201ENSMUST00000119806 1044 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Gm16523-201ENSMUST00000121253 592 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Gm11933-201ENSMUST00000121550 375 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Gm25320-201ENSMUST00000122551 324 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC8.45□□□□□ -1.06
Rrp1P56183 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Mir1983-201ENSMUST00000157523 132 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Gm24899-201ENSMUST00000158892 73 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm3611-201ENSMUST00000173687 877 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
Rrp1P56183 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Gm43815-201ENSMUST00000197676 990 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Gm7285-201ENSMUST00000198801 580 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm18629-201ENSMUST00000222496 884 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 AC069562.1-201ENSMUST00000224206 434 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Rrp1P56183 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Rrp1P56183 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm37420-201ENSMUST00000195332 2912 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm4863-201ENSMUST00000196907 1381 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Gm4451-201ENSMUST00000186000 1891 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Rrp1P56183 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.45□□□□□ -1.06
Rrp1P56183 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rrp1P56183 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Rrp1P56183 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Rrp1P56183 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.44□□□□□ -1.06
Rrp1P56183 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.44□□□□□ -1.06
Rrp1P56183 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rrp1P56183 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Rrp1P56183 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rrp1P56183 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rrp1P56183 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rrp1P56183 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rrp1P56183 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rrp1P56183 Olfr324-202ENSMUST00000214990 3624 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Rrp1P56183 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Gm15753-201ENSMUST00000119241 1062 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Gm12593-201ENSMUST00000120981 743 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Gm14749-201ENSMUST00000121269 333 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rrp1P56183 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC8.44□□□□□ -1.06
Rrp1P56183 Gm24994-201ENSMUST00000157414 121 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Gm20702-201ENSMUST00000176181 460 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rrp1P56183 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Rrp1P56183 Gm29273-201ENSMUST00000188880 262 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Gm17835-201ENSMUST00000196870 499 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rrp1P56183 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC8.44□□□□□ -1.06
Rrp1P56183 Gm9689-201ENSMUST00000210009 428 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Rrp1P56183 Gm45782-201ENSMUST00000212670 366 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC8.44□□□□□ -1.06
Rrp1P56183 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC8.44□□□□□ -1.06
Rrp1P56183 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Rrp1P56183 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rrp1P56183 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rrp1P56183 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rrp1P56183 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.44□□□□□ -1.06
Rrp1P56183 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Gm7647-201ENSMUST00000200996 1389 ntBASIC8.44□□□□□ -1.06
Rrp1P56183 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms