Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mir1930-201ENSMUST00000158799 84 ntBASIC8.08□□□□□ -1.12
NcanP55066 Gm20401-201ENSMUST00000173717 212 ntBASIC8.08□□□□□ -1.12
NcanP55066 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC8.08□□□□□ -1.12
NcanP55066 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC8.08□□□□□ -1.12
NcanP55066 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC8.08□□□□□ -1.12
NcanP55066 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC8.08□□□□□ -1.12
NcanP55066 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NcanP55066 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NcanP55066 Gm37017-201ENSMUST00000195266 747 ntBASIC8.08□□□□□ -1.12
NcanP55066 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NcanP55066 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NcanP55066 n-R5s169-201ENSMUST00000083110 120 ntBASIC8.08□□□□□ -1.12
NcanP55066 Lpar2-201ENSMUST00000034325 5701 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NcanP55066 Gucy1b3-204ENSMUST00000193597 3171 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NcanP55066 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC8.08□□□□□ -1.12
NcanP55066 C330007P06Rik-202ENSMUST00000115248 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NcanP55066 Ece2-207ENSMUST00000079600 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
NcanP55066 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NcanP55066 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
NcanP55066 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NcanP55066 4430402I18Rik-208ENSMUST00000179171 2638 ntTSL 5 BASIC8.08□□□□□ -1.12
NcanP55066 Olfr52-202ENSMUST00000215138 2751 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
NcanP55066 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NcanP55066 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.08□□□□□ -1.12
NcanP55066 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NcanP55066 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
NcanP55066 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NcanP55066 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
NcanP55066 Wdr48-205ENSMUST00000215307 3776 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NcanP55066 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC8.08□□□□□ -1.12
NcanP55066 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
NcanP55066 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
NcanP55066 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.07□□□□□ -1.12
NcanP55066 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC8.07□□□□□ -1.12
NcanP55066 Gm37891-201ENSMUST00000195585 1326 ntBASIC8.07□□□□□ -1.12
NcanP55066 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
NcanP55066 Tmem19-209ENSMUST00000219890 2949 ntTSL 5 BASIC8.07□□□□□ -1.12
NcanP55066 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
NcanP55066 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 G730013B05Rik-201ENSMUST00000180509 2176 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Zfp658-202ENSMUST00000107972 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Gm43621-201ENSMUST00000202733 2022 ntBASIC8.07□□□□□ -1.12
NcanP55066 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
NcanP55066 Gm45354-201ENSMUST00000199820 2557 ntBASIC8.07□□□□□ -1.12
NcanP55066 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
NcanP55066 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Adtrp-201ENSMUST00000072012 2440 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Gm12468-201ENSMUST00000116189 404 ntBASIC8.07□□□□□ -1.12
NcanP55066 Gm13333-201ENSMUST00000119424 781 ntBASIC8.07□□□□□ -1.12
NcanP55066 Gm13495-201ENSMUST00000121156 537 ntBASIC8.07□□□□□ -1.12
NcanP55066 Gm14847-201ENSMUST00000121978 519 ntBASIC8.07□□□□□ -1.12
NcanP55066 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC8.07□□□□□ -1.12
NcanP55066 Gm2735-201ENSMUST00000136133 277 ntBASIC8.07□□□□□ -1.12
NcanP55066 Gm23533-201ENSMUST00000157540 245 ntBASIC8.07□□□□□ -1.12
NcanP55066 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
NcanP55066 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
NcanP55066 Gm7289-201ENSMUST00000168993 734 ntBASIC8.07□□□□□ -1.12
NcanP55066 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
NcanP55066 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC8.07□□□□□ -1.12
NcanP55066 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC8.07□□□□□ -1.12
NcanP55066 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
NcanP55066 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.07□□□□□ -1.12
NcanP55066 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.07□□□□□ -1.12
NcanP55066 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
NcanP55066 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 C5ar2-202ENSMUST00000171425 3381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC8.07□□□□□ -1.12
NcanP55066 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
NcanP55066 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Gm35572-201ENSMUST00000212427 2310 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.07□□□□□ -1.12
NcanP55066 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
NcanP55066 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
NcanP55066 Tnfaip1-202ENSMUST00000108277 3768 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NcanP55066 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.06□□□□□ -1.12
NcanP55066 Sox5-204ENSMUST00000111748 1734 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Gm6327-201ENSMUST00000171185 1335 ntBASIC8.06□□□□□ -1.12
NcanP55066 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
NcanP55066 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Gm26416-201ENSMUST00000104280 134 ntBASIC8.06□□□□□ -1.12
NcanP55066 Gm25379-201ENSMUST00000104338 114 ntBASIC8.06□□□□□ -1.12
NcanP55066 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms