Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Pitpnm2os1-201ENSMUST00000161697 1618 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Epn2-202ENSMUST00000108711 4287 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Sox1P53783 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Sox1P53783 Slc12a4-202ENSMUST00000116429 3755 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Tacr3-201ENSMUST00000029822 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Serinc3-201ENSMUST00000017851 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 C78859-201ENSMUST00000212800 5943 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Sox1P53783 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 4930571K23Rik-201ENSMUST00000166958 2153 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Hbp1-202ENSMUST00000172314 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Acox3-202ENSMUST00000068947 3976 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Olfr1221-204ENSMUST00000217635 3753 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Sox1P53783 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Eif4enif1-201ENSMUST00000020734 3565 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Gabpa-202ENSMUST00000114184 2202 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Blzf1-201ENSMUST00000027866 3948 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC8.28□□□□□ -1.08
Sox1P53783 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Sox1P53783 Gm13414-201ENSMUST00000117516 727 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Gm12174-201ENSMUST00000119853 813 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Gm14186-201ENSMUST00000120804 137 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 n-R5s30-201ENSMUST00000122624 122 ntBASIC8.28□□□□□ -1.08
Sox1P53783 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC8.28□□□□□ -1.08
Sox1P53783 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC8.28□□□□□ -1.08
Sox1P53783 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Gm22687-201ENSMUST00000158301 105 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Gm24838-201ENSMUST00000158684 130 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC8.28□□□□□ -1.08
Sox1P53783 Gm2966-201ENSMUST00000166052 481 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Gm17204-201ENSMUST00000167936 478 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Sox1P53783 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Gm7481-201ENSMUST00000182020 995 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Gm27542-201ENSMUST00000184184 256 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC8.28□□□□□ -1.08
Sox1P53783 Gm36997-201ENSMUST00000195090 707 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC8.28□□□□□ -1.08
Sox1P53783 Gm4410-201ENSMUST00000199349 686 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Gm43709-201ENSMUST00000199870 559 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Gm42796-201ENSMUST00000199913 1087 ntBASIC8.28□□□□□ -1.08
Sox1P53783 AC121821.1-201ENSMUST00000199921 111 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC8.28□□□□□ -1.08
Sox1P53783 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC8.28□□□□□ -1.08
Sox1P53783 AC153801.1-201ENSMUST00000217904 947 ntBASIC8.28□□□□□ -1.08
Sox1P53783 AC132304.1-201ENSMUST00000218860 135 ntBASIC8.28□□□□□ -1.08
Sox1P53783 AC133183.2-201ENSMUST00000221543 280 ntBASIC8.28□□□□□ -1.08
Sox1P53783 AC157654.1-201ENSMUST00000224130 820 ntBASIC8.28□□□□□ -1.08
Sox1P53783 AC166822.1-201ENSMUST00000227667 636 ntBASIC8.28□□□□□ -1.08
Sox1P53783 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Sox1P53783 Pudp-201ENSMUST00000056460 1044 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Sox1P53783 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Sox1P53783 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.28□□□□□ -1.08
Sox1P53783 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC8.28□□□□□ -1.08
Sox1P53783 Gm12758-201ENSMUST00000127010 4175 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
Sox1P53783 Muc20-202ENSMUST00000115116 3673 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Abcb1b-201ENSMUST00000009058 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Sox1P53783 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Slc25a30-201ENSMUST00000022580 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Cdhr2-201ENSMUST00000037145 4129 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Cyb5d2-203ENSMUST00000156294 2158 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Sox1P53783 CT025600.1-202ENSMUST00000220264 2510 ntTSL 5 BASIC8.28□□□□□ -1.08
Sox1P53783 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Ints10-202ENSMUST00000070713 4192 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sox1P53783 March7-201ENSMUST00000067542 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Sox1P53783 AC159476.1-201ENSMUST00000215914 1668 ntBASIC8.27□□□□□ -1.08
Sox1P53783 Uroc1-202ENSMUST00000164761 3462 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Sox1P53783 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Mterf2-201ENSMUST00000050813 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Sox1P53783 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Pde4b-201ENSMUST00000030251 1923 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Gm6300-201ENSMUST00000192393 1498 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Gsta3-201ENSMUST00000027067 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC8.27□□□□□ -1.09
Sox1P53783 Cwc22-203ENSMUST00000111819 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Gm9597-202ENSMUST00000227632 1387 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Egf-202ENSMUST00000197079 3346 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 AC164437.4-204ENSMUST00000227169 4024 ntBASIC8.27□□□□□ -1.09
Sox1P53783 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sox1P53783 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms