Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC8.1□□□□□ -1.11
Usp4P35123 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.1□□□□□ -1.11
Usp4P35123 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp4P35123 Gm4871-201ENSMUST00000071421 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp4P35123 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp4P35123 Gm6083-201ENSMUST00000075518 357 ntBASIC8.1□□□□□ -1.11
Usp4P35123 Gm6807-201ENSMUST00000077435 888 ntBASIC8.1□□□□□ -1.11
Usp4P35123 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Usp4P35123 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Usp4P35123 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp4P35123 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.1□□□□□ -1.11
Usp4P35123 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp4P35123 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC8.1□□□□□ -1.11
Usp4P35123 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Usp4P35123 Raet1d-202ENSMUST00000182677 1425 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Usp4P35123 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Usp4P35123 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp4P35123 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp4P35123 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.1□□□□□ -1.11
Usp4P35123 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp4P35123 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
Usp4P35123 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC8.09□□□□□ -1.11
Usp4P35123 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Usp4P35123 Gm37372-201ENSMUST00000193577 3311 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 Gm26344-201ENSMUST00000104553 132 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC8.09□□□□□ -1.11
Usp4P35123 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC8.09□□□□□ -1.11
Usp4P35123 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC8.09□□□□□ -1.11
Usp4P35123 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Usp4P35123 Gm12073-201ENSMUST00000117382 524 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Gm12098-201ENSMUST00000118277 508 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Gm14645-201ENSMUST00000118597 417 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Gm15989-201ENSMUST00000121895 498 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Gm8089-201ENSMUST00000122463 968 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Gm6542-201ENSMUST00000153606 772 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Usp4P35123 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Usp4P35123 Gm20452-201ENSMUST00000174686 513 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Gm9149-201ENSMUST00000182724 1007 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC8.09□□□□□ -1.11
Usp4P35123 Gm27617-201ENSMUST00000184321 168 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC8.09□□□□□ -1.11
Usp4P35123 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC8.09□□□□□ -1.11
Usp4P35123 Gm18797-201ENSMUST00000190809 1174 ntBASIC8.09□□□□□ -1.11
Usp4P35123 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Gm43287-201ENSMUST00000197747 600 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Usp4P35123 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC8.09□□□□□ -1.11
Usp4P35123 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC8.09□□□□□ -1.11
Usp4P35123 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC8.09□□□□□ -1.11
Usp4P35123 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC8.09□□□□□ -1.11
Usp4P35123 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 Npr3-204ENSMUST00000228489 1969 ntBASIC8.09□□□□□ -1.11
Usp4P35123 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC8.09□□□□□ -1.11
Usp4P35123 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.09□□□□□ -1.11
Usp4P35123 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Usp4P35123 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.09□□□□□ -1.11
Usp4P35123 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Usp4P35123 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Usp4P35123 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp4P35123 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Usp4P35123 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.12
Usp4P35123 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Usp4P35123 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm44417-201ENSMUST00000203298 3359 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Xlr5c-202ENSMUST00000114503 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Usp4P35123 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC8.08□□□□□ -1.12
Usp4P35123 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC8.08□□□□□ -1.12
Usp4P35123 Gm12460-201ENSMUST00000117147 357 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm14032-201ENSMUST00000117686 1026 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm14519-201ENSMUST00000118490 312 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm14791-201ENSMUST00000119061 1166 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm13460-201ENSMUST00000121274 353 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Gm26357-201ENSMUST00000158218 115 ntBASIC8.08□□□□□ -1.12
Usp4P35123 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp4P35123 Gm18191-201ENSMUST00000174624 824 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms