Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col1a1P11087 Gm12944-201ENSMUST00000119262 463 ntBASIC8.79□□□□□ -1
Col1a1P11087 Gm15596-201ENSMUST00000121139 784 ntBASIC8.79□□□□□ -1
Col1a1P11087 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC8.79□□□□□ -1
Col1a1P11087 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC8.79□□□□□ -1
Col1a1P11087 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC8.79□□□□□ -1
Col1a1P11087 Gm26183-201ENSMUST00000157685 139 ntBASIC8.79□□□□□ -1
Col1a1P11087 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Col1a1P11087 Gm24824-201ENSMUST00000175097 78 ntBASIC8.79□□□□□ -1
Col1a1P11087 Mir7046-201ENSMUST00000183435 66 ntBASIC8.79□□□□□ -1
Col1a1P11087 Mir378d-201ENSMUST00000184232 110 ntBASIC8.79□□□□□ -1
Col1a1P11087 Gm29663-201ENSMUST00000186962 853 ntBASIC8.79□□□□□ -1
Col1a1P11087 Gm8101-201ENSMUST00000192796 478 ntBASIC8.79□□□□□ -1
Col1a1P11087 Gm17965-201ENSMUST00000193904 517 ntBASIC8.79□□□□□ -1
Col1a1P11087 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC8.79□□□□□ -1
Col1a1P11087 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC8.79□□□□□ -1
Col1a1P11087 Gm44971-201ENSMUST00000206192 337 ntBASIC8.79□□□□□ -1
Col1a1P11087 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col1a1P11087 Gm9267-201ENSMUST00000222831 404 ntBASIC8.79□□□□□ -1
Col1a1P11087 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Col1a1P11087 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
Col1a1P11087 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Col1a1P11087 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col1a1P11087 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col1a1P11087 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC8.79□□□□□ -1
Col1a1P11087 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Col1a1P11087 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col1a1P11087 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col1a1P11087 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC8.79□□□□□ -1
Col1a1P11087 Gm44007-201ENSMUST00000203845 2189 ntBASIC8.79□□□□□ -1
Col1a1P11087 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Col1a1P11087 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 AC165260.6-202ENSMUST00000224959 1958 ntBASIC8.78□□□□□ -1
Col1a1P11087 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.78□□□□□ -1
Col1a1P11087 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC8.78□□□□□ -1
Col1a1P11087 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC8.78□□□□□ -1
Col1a1P11087 Gm11609-201ENSMUST00000121926 793 ntBASIC8.78□□□□□ -1
Col1a1P11087 Gm14847-201ENSMUST00000121978 519 ntBASIC8.78□□□□□ -1
Col1a1P11087 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Col1a1P11087 Gm3344-201ENSMUST00000169610 603 ntBASIC8.78□□□□□ -1
Col1a1P11087 Gm20702-201ENSMUST00000176181 460 ntBASIC8.78□□□□□ -1
Col1a1P11087 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Gm8609-201ENSMUST00000182967 998 ntBASIC8.78□□□□□ -1
Col1a1P11087 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC8.78□□□□□ -1
Col1a1P11087 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Col1a1P11087 Gm17822-201ENSMUST00000204307 351 ntBASIC8.78□□□□□ -1
Col1a1P11087 Gm45394-201ENSMUST00000209240 1175 ntBASIC8.78□□□□□ -1
Col1a1P11087 AC155709.1-201ENSMUST00000218794 162 ntBASIC8.78□□□□□ -1
Col1a1P11087 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC8.78□□□□□ -1
Col1a1P11087 n-R5s169-201ENSMUST00000083110 120 ntBASIC8.78□□□□□ -1
Col1a1P11087 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC8.78□□□□□ -1
Col1a1P11087 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col1a1P11087 AC154171.3-201ENSMUST00000224519 2505 ntBASIC8.78□□□□□ -1
Col1a1P11087 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Col1a1P11087 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC8.78□□□□□ -1
Col1a1P11087 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC8.78□□□□□ -1
Col1a1P11087 Gm35808-201ENSMUST00000204769 2602 ntBASIC8.78□□□□□ -1
Col1a1P11087 Sycp1-202ENSMUST00000196988 3189 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col1a1P11087 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col1a1P11087 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Tnfaip1-202ENSMUST00000108277 3768 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Col1a1P11087 Gm45746-201ENSMUST00000212623 2447 ntBASIC8.78□□□□□ -1
Col1a1P11087 Gm19028-201ENSMUST00000189614 1873 ntBASIC8.78□□□□□ -1
Col1a1P11087 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col1a1P11087 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col1a1P11087 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col1a1P11087 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col1a1P11087 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC8.77□□□□□ -1
Col1a1P11087 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC8.77□□□□□ -1
Col1a1P11087 Gm25093-201ENSMUST00000103993 132 ntBASIC8.77□□□□□ -1
Col1a1P11087 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC8.77□□□□□ -1
Col1a1P11087 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
Col1a1P11087 Gm13732-201ENSMUST00000117753 535 ntBASIC8.77□□□□□ -1
Col1a1P11087 Gm9439-201ENSMUST00000119554 973 ntBASIC8.77□□□□□ -1
Col1a1P11087 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC8.77□□□□□ -1
Col1a1P11087 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC8.77□□□□□ -1
Col1a1P11087 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.77□□□□□ -1
Col1a1P11087 Gm28801-201ENSMUST00000188761 449 ntBASIC8.77□□□□□ -1
Col1a1P11087 Gm42708-201ENSMUST00000196332 905 ntBASIC8.77□□□□□ -1
Col1a1P11087 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.77□□□□□ -1
Col1a1P11087 Gm19047-201ENSMUST00000220922 1099 ntBASIC8.77□□□□□ -1
Col1a1P11087 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms