Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
NpcdF8VQB8 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
NpcdF8VQB8 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 CT025600.1-202ENSMUST00000220264 2510 ntTSL 5 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Rars2-201ENSMUST00000029968 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 Naalad2-204ENSMUST00000166825 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Egf-209ENSMUST00000199615 3211 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Ints14-202ENSMUST00000170517 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Gm12653-201ENSMUST00000117778 561 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 Gm14489-201ENSMUST00000120868 901 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Gm6838-201ENSMUST00000172851 582 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 Mir7046-201ENSMUST00000183435 66 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 Mir6244-201ENSMUST00000184156 117 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Gm44656-201ENSMUST00000208428 490 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Gm7419-201ENSMUST00000209962 925 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 AC151904.5-201ENSMUST00000218975 549 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 Gm31711-201ENSMUST00000220687 196 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 AC091237.1-201ENSMUST00000224911 637 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 n-R5s41-201ENSMUST00000083025 119 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Gm1070-201ENSMUST00000114185 2874 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 AW822252-205ENSMUST00000192662 1352 ntBASIC9.49□□□□□ -0.89
NpcdF8VQB8 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
NpcdF8VQB8 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm9256-201ENSMUST00000198106 1420 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm16497-201ENSMUST00000222024 2842 ntTSL 2 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm23701-201ENSMUST00000103893 110 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm37072-201ENSMUST00000194570 837 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm17937-201ENSMUST00000197908 742 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm18839-201ENSMUST00000204292 670 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 AC241621.1-201ENSMUST00000224499 430 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 AC165281.1-201ENSMUST00000225713 1011 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm23054-201ENSMUST00000082804 162 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm43158-201ENSMUST00000198484 1555 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm37877-201ENSMUST00000191630 2709 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm16316-201ENSMUST00000154065 3393 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms