Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 CT030170.7-201ENSMUST00000223372 103 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm43196-201ENSMUST00000201762 2114 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Filip1-201ENSMUST00000093811 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Xntrpc-201ENSMUST00000084843 4173 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gpatch2-206ENSMUST00000160471 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Nrxn3-202ENSMUST00000110130 3654 ntTSL 2 BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm12287-201ENSMUST00000119770 707 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm15009-201ENSMUST00000121387 322 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm35013-201ENSMUST00000197218 832 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm4742-201ENSMUST00000200261 771 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm46223-201ENSMUST00000215196 675 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm43618-201ENSMUST00000197392 3451 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 D830044D21Rik-201ENSMUST00000143315 3897 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm26790-201ENSMUST00000181078 2291 ntTSL 5 BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Zfp536-206ENSMUST00000176205 4372 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm2199-201ENSMUST00000119065 874 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm14352-201ENSMUST00000119250 449 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm13493-201ENSMUST00000120318 493 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 n-R5s85-201ENSMUST00000083453 113 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Mir296-201ENSMUST00000083587 79 ntBASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Vmn1r201-201ENSMUST00000091730 903 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col6a3E9PWQ3 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 4930543N07Rik-201ENSMUST00000209357 1364 ntTSL 5 BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Gm12842-201ENSMUST00000117298 476 ntBASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Gm23995-201ENSMUST00000158060 129 ntBASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 AC163040.1-201ENSMUST00000222979 4288 ntBASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Gm42811-201ENSMUST00000201951 2768 ntBASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Gm11624-201ENSMUST00000118579 1041 ntBASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Gm16200-201ENSMUST00000120385 331 ntBASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Gm20778-201ENSMUST00000178524 627 ntBASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Gm13108-201ENSMUST00000122287 1455 ntBASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col6a3E9PWQ3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Gm12834-201ENSMUST00000121855 2829 ntBASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Gm11320-201ENSMUST00000119434 463 ntBASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Gm15967-201ENSMUST00000120027 1116 ntBASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Gm24733-201ENSMUST00000158863 253 ntBASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Gm3140-201ENSMUST00000163523 481 ntBASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC7.21□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms