Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ska1Q9CPV1 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Ska1Q9CPV1 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC7.18□□□□□ -1.26
Ska1Q9CPV1 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ska1Q9CPV1 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ska1Q9CPV1 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Ska1Q9CPV1 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ska1Q9CPV1 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Gm6931-201ENSMUST00000183103 371 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Gm28645-201ENSMUST00000185859 564 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Gm43471-201ENSMUST00000197550 467 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Gm30708-201ENSMUST00000202183 312 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Gm19154-201ENSMUST00000223330 940 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 AC163667.2-201ENSMUST00000223769 791 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 AC207128.1-201ENSMUST00000225928 799 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Olfr5-201ENSMUST00000086318 1044 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Gm37510-201ENSMUST00000194151 4762 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 AC125074.1-201ENSMUST00000227970 1331 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Gm44249-201ENSMUST00000204538 1805 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 AC159195.2-201ENSMUST00000223670 3757 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ska1Q9CPV1 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Klf5-202ENSMUST00000226784 2852 ntBASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Gm23946-201ENSMUST00000104423 197 ntBASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Gm24257-201ENSMUST00000104472 131 ntBASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Gm23945-201ENSMUST00000179609 92 ntBASIC7.16□□□□□ -1.26
Ska1Q9CPV1 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Gm29362-201ENSMUST00000187898 133 ntBASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Gm6750-201ENSMUST00000189273 268 ntBASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Gm44306-201ENSMUST00000203058 203 ntBASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 AC154506.2-201ENSMUST00000225481 1276 ntBASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Gm24696-201ENSMUST00000083878 134 ntBASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Mir484-201ENSMUST00000093566 67 ntBASIC7.16□□□□□ -1.26
Ska1Q9CPV1 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ska1Q9CPV1 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms