Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 AC166574.1-201ENSMUST00000226916 1309 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Gm18697-201ENSMUST00000191179 2126 ntBASIC6.73□□□□□ -1.33
Scrt1Q99M85 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC6.73□□□□□ -1.33
Scrt1Q99M85 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Gm8312-201ENSMUST00000119380 618 ntBASIC6.73□□□□□ -1.33
Scrt1Q99M85 Gm24893-201ENSMUST00000122745 369 ntBASIC6.73□□□□□ -1.33
Scrt1Q99M85 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Gm7651-201ENSMUST00000173398 901 ntBASIC6.73□□□□□ -1.33
Scrt1Q99M85 Gm17973-201ENSMUST00000174509 520 ntBASIC6.73□□□□□ -1.33
Scrt1Q99M85 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.73□□□□□ -1.33
Scrt1Q99M85 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC6.73□□□□□ -1.33
Scrt1Q99M85 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Gm43849-201ENSMUST00000201086 215 ntBASIC6.73□□□□□ -1.33
Scrt1Q99M85 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.73□□□□□ -1.33
Scrt1Q99M85 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 AC124709.1-201ENSMUST00000227296 620 ntBASIC6.73□□□□□ -1.33
Scrt1Q99M85 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.73□□□□□ -1.33
Scrt1Q99M85 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Mir146b-201ENSMUST00000093619 109 ntBASIC6.73□□□□□ -1.33
Scrt1Q99M85 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC6.73□□□□□ -1.33
Scrt1Q99M85 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Gm45635-201ENSMUST00000211516 2134 ntBASIC6.73□□□□□ -1.33
Scrt1Q99M85 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC6.73□□□□□ -1.33
Scrt1Q99M85 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm17841-201ENSMUST00000210711 2425 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm44834-201ENSMUST00000206671 1396 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 CT009530.1-201ENSMUST00000227348 2927 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm14099-201ENSMUST00000117769 605 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm15739-201ENSMUST00000118049 872 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm6491-201ENSMUST00000118273 990 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm24050-201ENSMUST00000158623 290 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm2976-201ENSMUST00000160362 513 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 2610001J05Rik-204ENSMUST00000185361 767 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm28428-201ENSMUST00000188886 697 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm28864-201ENSMUST00000189251 644 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm43196-201ENSMUST00000201762 2114 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm9652-201ENSMUST00000209345 163 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 AC140451.1-201ENSMUST00000227984 737 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 AC107452.2-201ENSMUST00000228415 363 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Glycam1-204ENSMUST00000228895 641 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms