Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm18697-201ENSMUST00000191179 2126 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 4933402E13Rik-201ENSMUST00000051414 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Pnma2-202ENSMUST00000122431 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Nt5dc1-201ENSMUST00000047885 2743 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Rnf141-204ENSMUST00000175981 2333 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Nek10-202ENSMUST00000112630 3348 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm11212-201ENSMUST00000118337 618 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm14554-201ENSMUST00000119548 661 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm4910-201ENSMUST00000119605 366 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm12124-201ENSMUST00000120504 679 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm11370-201ENSMUST00000120583 260 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm12297-201ENSMUST00000121380 979 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm25179-201ENSMUST00000122632 128 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm26407-201ENSMUST00000158504 307 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Mir6999-201ENSMUST00000183498 61 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm37328-201ENSMUST00000193191 640 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm17979-201ENSMUST00000196646 611 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm42429-201ENSMUST00000198579 558 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm31579-201ENSMUST00000203306 966 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm18689-201ENSMUST00000203969 902 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm33882-201ENSMUST00000208990 651 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm18192-201ENSMUST00000210174 941 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm8512-201ENSMUST00000215367 471 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm3011-201ENSMUST00000215669 582 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 AC168880.1-201ENSMUST00000225113 707 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Nsa2-203ENSMUST00000225410 974 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Elp3-203ENSMUST00000225355 2771 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Prkar1a-203ENSMUST00000106677 3513 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm16701-201ENSMUST00000181309 1627 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm10472-201ENSMUST00000193014 2102 ntBASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Sgpl1-201ENSMUST00000092498 4070 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Pla2g6-210ENSMUST00000174021 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Ghitm-202ENSMUST00000165649 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Mlip-210ENSMUST00000184322 2668 ntTSL 5 BASIC8.06□□□□□ -1.12
Pcdh19Q80TF3 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 AC123832.1-201ENSMUST00000214120 2371 ntBASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 AC122887.1-201ENSMUST00000219265 2722 ntBASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 AC164437.4-204ENSMUST00000227169 4024 ntBASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Pcdh19Q80TF3 Tfrc-202ENSMUST00000120680 1860 ntTSL 2 BASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 136.3 ms