Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm7502-201ENSMUST00000169235 733 ntBASIC9.02□□□□□ -0.97
Vps54Q5SPW0 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm38099-201ENSMUST00000193280 3170 ntBASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm19028-201ENSMUST00000189614 1873 ntBASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm43534-201ENSMUST00000197685 2853 ntBASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Gm42866-201ENSMUST00000195919 3304 ntBASIC9.02□□□□□ -0.97
Vps54Q5SPW0 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Gm22470-201ENSMUST00000104117 130 ntBASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Gm15778-201ENSMUST00000118469 608 ntBASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Gm22035-201ENSMUST00000157284 228 ntBASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Gm23392-201ENSMUST00000157580 113 ntBASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Gm37270-201ENSMUST00000194277 330 ntBASIC9.01□□□□□ -0.97
Vps54Q5SPW0 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Gm7419-201ENSMUST00000209962 925 ntBASIC9.01□□□□□ -0.97
Vps54Q5SPW0 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 CT010472.1-201ENSMUST00000224000 704 ntBASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 CT571245.1-201ENSMUST00000218642 3465 ntBASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Gm8844-201ENSMUST00000119460 2614 ntBASIC9.01□□□□□ -0.97
Vps54Q5SPW0 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps54Q5SPW0 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm7842-201ENSMUST00000217691 1379 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm2762-207ENSMUST00000202739 2665 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC9□□□□□ -0.97
Vps54Q5SPW0 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC9□□□□□ -0.97
Vps54Q5SPW0 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Vps54Q5SPW0 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Vps54Q5SPW0 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Vps54Q5SPW0 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm12346-201ENSMUST00000121455 2255 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm42969-201ENSMUST00000199858 3631 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC9□□□□□ -0.97
Vps54Q5SPW0 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm15665-201ENSMUST00000119116 847 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm16056-201ENSMUST00000119293 135 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm12331-201ENSMUST00000119927 622 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm13525-201ENSMUST00000120607 478 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm12593-201ENSMUST00000120981 743 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm15362-201ENSMUST00000121459 388 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC9□□□□□ -0.97
Vps54Q5SPW0 Mir1932-201ENSMUST00000157390 90 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC9□□□□□ -0.97
Vps54Q5SPW0 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm43812-202ENSMUST00000202701 581 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Vps54Q5SPW0 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm32842-201ENSMUST00000212653 738 ntBASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms