Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm17149-201ENSMUST00000164712 375 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Mir3060-201ENSMUST00000175339 83 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm6100-201ENSMUST00000180253 403 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm26736-201ENSMUST00000180425 1236 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm38164-201ENSMUST00000192810 330 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm43013-201ENSMUST00000198216 247 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm18995-201ENSMUST00000202981 520 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 CT009546.3-201ENSMUST00000220914 208 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm5903-201ENSMUST00000121836 2325 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC8.01□□□□□ -1.13
Trim43aQ3TL54 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim43aQ3TL54 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm44021-201ENSMUST00000203055 3516 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm43769-201ENSMUST00000201871 4323 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm26831-201ENSMUST00000181458 1380 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Trim43aQ3TL54 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Trim43aQ3TL54 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8□□□□□ -1.13
Trim43aQ3TL54 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm14891-201ENSMUST00000117378 596 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm12075-201ENSMUST00000117426 397 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm14032-201ENSMUST00000117686 1026 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm11416-201ENSMUST00000119111 863 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm13683-201ENSMUST00000119497 1076 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm5883-201ENSMUST00000120735 495 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm11838-201ENSMUST00000121999 231 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Trim43aQ3TL54 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm17867-201ENSMUST00000188981 391 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm42431-201ENSMUST00000196880 323 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm42472-201ENSMUST00000201626 859 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm42959-201ENSMUST00000202184 212 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm18943-201ENSMUST00000207357 1216 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm44743-201ENSMUST00000209062 386 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm45712-201ENSMUST00000212417 335 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 AL645704.1-201ENSMUST00000221642 604 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 CT010480.3-201ENSMUST00000224712 259 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 AC154738.3-201ENSMUST00000227953 409 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm10029-201ENSMUST00000089635 330 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm44101-201ENSMUST00000203951 2221 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Gm3883-201ENSMUST00000098119 3229 ntBASIC8□□□□□ -1.13
Trim43aQ3TL54 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8□□□□□ -1.13
Trim43aQ3TL54 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim43aQ3TL54 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Gm42549-201ENSMUST00000202392 7004 ntBASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Gm11997-201ENSMUST00000118697 313 ntBASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Gm14380-201ENSMUST00000122298 431 ntBASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Mir7115-201ENSMUST00000184275 64 ntBASIC7.99□□□□□ -1.13
Trim43aQ3TL54 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC7.99□□□□□ -1.13
Trim43aQ3TL54 Gm17835-201ENSMUST00000196870 499 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms