Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx4Q07424 Gm37159-201ENSMUST00000192720 3605 ntBASIC6.05□□□□□ -1.44
Cdx4Q07424 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx4Q07424 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx4Q07424 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx4Q07424 Gm37321-201ENSMUST00000195742 1872 ntBASIC6.05□□□□□ -1.44
Cdx4Q07424 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Cyp19a1-203ENSMUST00000215736 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm18194-202ENSMUST00000210952 3442 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 AC162467.2-201ENSMUST00000219397 2571 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm14036-201ENSMUST00000118248 480 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm14645-201ENSMUST00000118597 417 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm8644-201ENSMUST00000118619 596 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm22562-201ENSMUST00000157334 111 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm24083-201ENSMUST00000175174 120 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm9149-201ENSMUST00000182724 1007 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm29144-201ENSMUST00000189235 339 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm29238-201ENSMUST00000189709 695 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm28607-201ENSMUST00000190142 339 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm28121-201ENSMUST00000191420 339 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm17530-201ENSMUST00000194336 472 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm42977-201ENSMUST00000197497 144 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm7478-201ENSMUST00000201054 581 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm18973-201ENSMUST00000205814 511 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm30196-201ENSMUST00000208957 160 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm5948-201ENSMUST00000219627 839 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 AC102689.1-201ENSMUST00000220511 1090 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 CT009556.2-201ENSMUST00000227980 1123 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 AC131586.4-201ENSMUST00000228424 668 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm15433-201ENSMUST00000097671 891 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 AC158986.1-201ENSMUST00000228391 3455 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gm44141-201ENSMUST00000204231 1583 ntBASIC6.04□□□□□ -1.44
Cdx4Q07424 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdx4Q07424 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx4Q07424 Gpnmb-201ENSMUST00000031840 3701 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx4Q07424 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx4Q07424 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx4Q07424 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms