Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC6.88□□□□□ -1.31
Col8a1Q00780 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm5173-201ENSMUST00000219616 950 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm8153-201ENSMUST00000219844 952 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 AC162183.1-201ENSMUST00000224843 472 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Cthrc1-204ENSMUST00000226433 596 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Lcn2-201ENSMUST00000050785 915 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm26244-201ENSMUST00000083435 164 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm5614-201ENSMUST00000091097 318 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Sprr2a2-201ENSMUST00000071805 2867 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Slc15a5-206ENSMUST00000171804 2461 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Dgkg-202ENSMUST00000089925 3555 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Mitf-203ENSMUST00000101123 2144 ntTSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Mitf-204ENSMUST00000113339 2144 ntTSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm43515-201ENSMUST00000197930 2141 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm37949-201ENSMUST00000192808 2091 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Nbr1-207ENSMUST00000107218 3353 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Mss51-201ENSMUST00000022353 1826 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Sp100-202ENSMUST00000066427 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Vwa3b-203ENSMUST00000117172 1636 ntAPPRIS P5 TSL 2 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Vmn1r37-206ENSMUST00000228791 1617 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm45407-201ENSMUST00000209499 3676 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Col8a1Q00780 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Mrps31-201ENSMUST00000033934 1515 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Eci2-213ENSMUST00000178421 1414 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 AC122402.1-201ENSMUST00000225199 2303 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Serpina3f-202ENSMUST00000121337 2248 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm23946-201ENSMUST00000104423 197 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm12611-201ENSMUST00000119452 1037 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm24139-201ENSMUST00000122780 288 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm7162-201ENSMUST00000161205 1024 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm7763-201ENSMUST00000182220 1006 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm9381-201ENSMUST00000182285 1012 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm9729-201ENSMUST00000196364 265 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm38433-201ENSMUST00000196978 856 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm42438-201ENSMUST00000197832 974 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm18748-201ENSMUST00000198507 622 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm42723-201ENSMUST00000199966 1044 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm9419-201ENSMUST00000200672 567 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm18012-201ENSMUST00000204558 773 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm44615-201ENSMUST00000206548 358 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm6063-201ENSMUST00000206958 485 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm6869-201ENSMUST00000220334 734 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm6841-201ENSMUST00000220602 598 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 AC154594.1-201ENSMUST00000225171 1273 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 AC139209.2-201ENSMUST00000227680 1208 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 AC113031.6-202ENSMUST00000228468 1145 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Mrgprb4-201ENSMUST00000094388 1219 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Fbxo3-203ENSMUST00000111135 3740 ntTSL 5 BASIC6.87□□□□□ -1.31
Col8a1Q00780 CT009757.2-201ENSMUST00000220806 2028 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col8a1Q00780 Mill2-205ENSMUST00000227379 1998 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Col8a1Q00780 Gm9877-201ENSMUST00000064271 2627 ntBASIC6.87□□□□□ -1.31
Col8a1Q00780 1700001L19Rik-201ENSMUST00000022007 1826 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms