Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gm6100-201ENSMUST00000180253 403 ntBASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gm26587-201ENSMUST00000180795 989 ntBASIC10.08□□□□□ -0.8
Nkx2-3P97334 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gm28688-201ENSMUST00000187301 268 ntBASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gm21742-201ENSMUST00000189352 548 ntBASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gm31306-201ENSMUST00000197517 508 ntBASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gm5885-202ENSMUST00000203357 528 ntBASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gm18012-201ENSMUST00000204558 773 ntBASIC10.08□□□□□ -0.8
Nkx2-3P97334 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gm45240-201ENSMUST00000211437 674 ntBASIC10.08□□□□□ -0.8
Nkx2-3P97334 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC10.08□□□□□ -0.8
Nkx2-3P97334 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gm5250-201ENSMUST00000059065 321 ntBASIC10.08□□□□□ -0.8
Nkx2-3P97334 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Abca8a-202ENSMUST00000100287 5619 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Abca8a-204ENSMUST00000106664 5617 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-3P97334 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Kalrn-212ENSMUST00000114973 5253 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gm6545-201ENSMUST00000217186 1786 ntBASIC10.08□□□□□ -0.8
Nkx2-3P97334 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Gm43544-201ENSMUST00000196474 2472 ntBASIC10.08□□□□□ -0.8
Nkx2-3P97334 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-3P97334 Rsf1-201ENSMUST00000107153 11124 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-3P97334 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 Pcdhga2-201ENSMUST00000193869 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm26902-201ENSMUST00000181307 3100 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Ccnd2-201ENSMUST00000000188 6330 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Dhx30-202ENSMUST00000111991 3829 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm13252-201ENSMUST00000119355 321 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm15160-201ENSMUST00000120553 907 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm9159-201ENSMUST00000120661 566 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm25432-201ENSMUST00000158284 66 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm5973-201ENSMUST00000178542 496 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Mir1892-201ENSMUST00000197752 80 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm44245-201ENSMUST00000204304 232 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm31663-202ENSMUST00000208481 1190 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm6841-201ENSMUST00000220602 598 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 AC192616.1-201ENSMUST00000221922 132 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 AC165287.1-201ENSMUST00000224985 178 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Vrk1-203ENSMUST00000085026 3711 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm44562-201ENSMUST00000207194 1347 ntBASIC10.07□□□□□ -0.8
Nkx2-3P97334 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-3P97334 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-3P97334 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-3P97334 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-3P97334 Gm2080-201ENSMUST00000211299 1573 ntBASIC10.06□□□□□ -0.8
Nkx2-3P97334 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-3P97334 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-3P97334 Tmod3-201ENSMUST00000072232 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-3P97334 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Nkx2-3P97334 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-3P97334 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-3P97334 Ppp4r1l-ps-205ENSMUST00000141051 4466 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-3P97334 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-3P97334 Gm22660-201ENSMUST00000104193 130 ntBASIC10.06□□□□□ -0.8
Nkx2-3P97334 Gm24195-201ENSMUST00000116804 137 ntBASIC10.06□□□□□ -0.8
Nkx2-3P97334 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-3P97334 Gm15194-201ENSMUST00000120453 434 ntBASIC10.06□□□□□ -0.8
Nkx2-3P97334 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC10.06□□□□□ -0.8
Nkx2-3P97334 Gm371-201ENSMUST00000142240 1245 ntBASIC10.06□□□□□ -0.8
Nkx2-3P97334 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC10.06□□□□□ -0.8
Nkx2-3P97334 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC10.06□□□□□ -0.8
Nkx2-3P97334 Gm28503-201ENSMUST00000185966 147 ntBASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms